Rhinolophus ferrumequinum (greater horseshoe bat): 117022057
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Entry
117022057 CDS
T07722
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03030
DNA replication
rfq03410
Base excision repair
rfq03420
Nucleotide excision repair
rfq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117022057 (RFC1)
03410 Base excision repair
117022057 (RFC1)
03420 Nucleotide excision repair
117022057 (RFC1)
03430 Mismatch repair
117022057 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117022057 (RFC1)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117022057 (RFC1)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117022057 (RFC1)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117022057 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
AAA_14
AAA_5
BRCT_2
AAA_30
RuvB_N
AAA_16
AAA_18
AAA_7
AAA_33
Zeta_toxin
AAA_19
nSTAND3
AAA_17
RNA_helicase
SKI
AAA_28
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
117022057
NCBI-ProteinID:
XP_032961629
Ensembl:
ENSRFEG00010004720
UniProt:
A0A671E5N2
LinkDB
All DBs
Position
5:60920548..60985604
Genome browser
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVSETVKKNEKTKTAEETLKGKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLSLSPKPSKILRQDPITYISETDEDDDFMCKK
TASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASRRKETSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKNKK
VQKDPEERETFSSVQANLSKAEKCKYPYKVKTEQFLDERKNYSPKRQTKCESSKESQHHS
KSSAHKIGETSSPKASSTVARLKKKQESFSKETEPVASKRKENAIELKETRTPKKIKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDGGQSKSDKAAALGTKIIDEDGLLDLIRT
MPGKKSKYEIAVELEMNKEKSKLHRTPPKNDQEKRKTSPIKKESESKKSRLTPKTDSSTN
AVKKEKNVCHRSLAFKEQVATETNGDSRARNLADDSSANKVENLLWVDKYKPTSLKTIIG
QQGEQSCANKLLRWLQNWHKSPSEEKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKEMIAESLNNTSIKGFCSSEEARSVSTKHALIMD
EVDGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
KKDIKLGPFDVARKVFVAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGD
MKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRGNMTQFPTFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDALVQPLTSQGVEGVQD
VVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAV
KTSRYSTGPSLNSEYNEELNEDDSQSDEKDQDAMETDAMIKKKTKSSKPSKSEKDKESRK
GKGKSSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggagttataccaagtgggaagaaacctgtaagtgaaaca
gtaaagaagaatgagaaaacaaagactgctgaagaaactttaaaaggaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaaacaaccagagaaattgtcgttgtctcctaaacctagtaaaattctacgg
caggatcctattacttacatttcagaaacagatgaagatgacgactttatgtgtaagaag
acagcctctaaatcaaaagagaatggaggctccacaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataagcctttatcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtggcaagcaggagaaaagagacttcacaaaatgcagatgattccagattaaatgat
gaggccatcgccaagcaactgcaacttgatgaagatgcggagctagagagacaactgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacctaagaacaaaaag
gttcaaaaggacccagaagagagagaaacgttttcatctgtccaagccaatttaagtaaa
gcagaaaaatgtaaatatccttataaagtaaaaacagaacaatttctggatgaaagaaag
aactatagtcctaagaggcaaactaaatgtgaaagttctaaagaatctcagcaccattcc
aagtcgtcagctcacaaaataggagaaacttcttctcctaaagctagttccacggtggca
cgtttgaaaaaaaaacaagagagtttttctaaagaaacagaacctgtggcctcaaaaaga
aaagaaaatgccattgaattgaaagagacaagaactcctaagaaaatcaaaagctctcca
gctaaaaaagagtctgtaagtcctgaagattctgaaaagagacgcactaattatcaagct
tatcgaagttacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaaagagatgaagccaagtctctaattgaacgttatggaggaaaagtaaccggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgcgatggtggacagtccaagagtgataag
gcagcagccttggggacaaaaattattgatgaagatggcctgttggatctgattcgaact
atgccaggcaagaagtccaaatatgaaatagcagttgaacttgagatgaataaagaaaag
tccaaattgcacagaacacctccaaaaaatgaccaagaaaaaagaaaaactagtccaatt
aagaaagaatcagaatctaaaaagagcagactgactcccaaaacagacagctctacaaat
gcagtaaaaaaggaaaaaaatgtgtgtcatagaagcctggcgttcaaggagcaggtggcc
acggagacaaatggtgacagccgggctaggaatttggctgatgacagcagtgcaaacaaa
gtggaaaatttgctctgggtggataaatacaagccaacctcactgaagaccataattgga
cagcaaggtgaacagagctgtgccaacaaactcctacgctggctccagaactggcacaag
agtccatctgaagagaagaaacatgcagcaaagtttggtaaatttgccggcaaagatgat
ggctctagttttaaagcagcattgctctcaggccctccaggtgttggcaaaacaaccaca
gcctctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgatacg
cggagtaagaacagtttgaaggagatgattgccgagtcactcaataataccagcatcaaa
ggcttctgttcaagtgaagaagcccgttcagtaagcacgaaacatgccctcatcatggat
gaagtagatggcatggcaggcagtgaggacaggggaggaattcaggaattaattggcctg
ataaaacatacgaaaattcccattatttgtatgtgcaatgatagaaatcaccccaagatc
cgctctttggttcattactgttttgatcttcgttttcaaagacctcgggttgaacagatt
aagggtgctatgctctctattgcatttaaagagggtttaaagattccccctccagctatg
aatgaaatcattttgggagccaatcaagatatcagacaggttttacacaatctgagtatg
tggtgtgcccgaagtaaggcactaacctatgaccaggccaaggctgattctcatagagcc
aaaaaggatatcaaactgggcccatttgatgttgctcggaaagtgtttgtagccggagaa
gagacagctcacatgtcacttgtggacaagtcagatctcttttttcatgattattcaata
gcacccctctttgtccaggagaactacttacatgtgaagcctgtagctgcaggaggggac
atgaaaaagcacttgatgcttttaagcagagcggcagatagcatatgtgatggtgaccta
gtggaccgtcagatccggagtaggcaaaactggagtcttctgcccacacaggccatttat
gccagtgttcttcctggagagttaatgaggggtaacatgacccagtttcccactttccca
agctggttgggtaagcactcgtccacaggcaaacatgaccgtattgttcaggacctagca
ttgcatatgagtctcaggacttactccagcaaaaggactataaatatggattatctgtca
catataagggatgcacttgtacagcccttgacctcgcaaggggtagaaggagtacaggat
gttgttgctcttatggacgcatattatttgatgaaagaagactttgagaatatcatggaa
attagcagctggggaggcaaacctagtcccttctccaagctggatcccaaggtgaaagca
gcctttacaagagcttacaataaggaagtccaccttactccatattcacttcaggcagta
aagacatccagatacagcacaggcccatcactgaattctgaatataacgaagagttaaat
gaagatgactctcaatctgatgagaaagatcaagacgctatggaaactgatgctatgatc
aagaaaaagacaaaatcttcaaagccttcaaaatccgaaaaagataaggagtccagaaaa
ggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
