Rhinolophus ferrumequinum (greater horseshoe bat): 117022226
Help
Entry
117022226 CDS
T07722
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
117022226 (TBC1D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117022226 (TBC1D1)
Membrane trafficking [BR:
rfq04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117022226 (TBC1D1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117022226 (TBC1D1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117022226 (TBC1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
ER
Motif
Other DBs
NCBI-GeneID:
117022226
NCBI-ProteinID:
XP_032961995
Ensembl:
ENSRFEG00010000328
UniProt:
A0A671DQF9
LinkDB
All DBs
Position
5:complement(61776850..61985863)
Genome browser
AA seq
1277 aa
AA seq
DB search
MEPITFTARKHPFPTEVWVDFGLQLVGSLPVHALTTMPMLPWVVAEVRRLSGQSSIKEPG
SKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQHVHKLIHNSHDPSYFACLIKD
DAANKRSICYVFKADDQTKVPEIISSIRQAGKIARQEELHCPSEFDDTFAKKFEVLFCGR
VSVAHKKAPPALIDECIEKFNHISCSRKADFDLVSQNSETANPVGGFAFTDRLRTVHQPS
GKGEQGQRPMRKSFSQPGLRSLAYKKEFQDRSFRSNSFFSSFEENDIENHLISGHNIVQP
TDIEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGG
GGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTKAPAQLCEGCPLQGLHKLCERIE
GMNSSKTKLELQKHLTTLTNQEQAMIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVH
IHIGEIKQTSQIAAENIGTELPSSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQE
HSTSLDLDSSMSSTLSNTSKEPSVCEKEALPVSESSFRVLGSSDDLSSDSEGHSAEEPAP
LSPQQGFRRRANTLSHFPVECQQPPEPAQGSPGVSQRKLMRYHSVGTETPHERNGNHPPV
GESKSCSGPSAPAPPPRLNPSASSPNFFKYLKHNSSGEQSGNAVPKSISYRNALRKKLHS
SSSVPNFLKFLAPVDENNTSDFMNTKRDFESKANHLGEAIGTSVKTRRHSWRQQIFLRVA
TPQKACDSPSRYEDYSELGELPPRSPLEPVCEDRPSGPVLEEKKRTPRELRELWQKAILQ
QILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTAVWEKMLSTPGRSKIKFDM
EKMHSAVGQGVPRHHRGEIWKFLAEQFHLKHQLPSKQPKDTPYKELLKQLTSQQHAILID
LGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFH
MLKFLMFDRGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFL
TVFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLP
NLGLVQMEKTINQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDRLEKTNSSLR
KQNLDLLEQLQVANGRIQNLEATVEKLLTSESKLKQAALALELERSALLQTVEELQRRTA
ELGGPQPDLTLPQPTGD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaataacattcacagcgaggaaacatccgtttcctactgaggtctgggtggac
tttggcctccagctggtgggctccttgccggtgcatgctctgaccaccatgcccatgctg
ccgtgggtcgtggcagaggtgcgacggctcagtgggcagtcctccataaaggagcctggt
agcaagcaagtccggctttgtgtttcaccctccggactgagatgtgaacctgagccagga
aaaagtcaacaatgggatcccctgatctgttccagcatcttcgagtgtaagcctcagcac
gtgcataagctgattcacaacagtcacgacccaagttactttgcttgtctgattaaggac
gatgcagccaataagcggagtatctgctacgtgttcaaagctgatgatcaaacaaaagtg
cctgagatcatcagctccatccgccaggccgggaagattgcccgccaggaggagctccat
tgcccgtcggagtttgacgacacgttcgccaagaagttcgaggtgctcttttgtggccgg
gtgtcggtggcgcacaagaaggccccaccagccctaatcgatgagtgcattgagaagttc
aaccacatcagttgcagcaggaaagccgactttgacttggtctcccagaattccgagacc
gccaatcctgtgggagggtttgccttcacggataggttgcgaactgtgcaccagccctcc
gggaagggggagcagggccagcggccaatgcgcaagtccttctcccagcctgggctgcgc
tctttggcctataagaaggaattccaagatcgaagctttcgaagtaatagtttcttcagc
tcttttgaggaaaatgacattgagaaccacctcatcagtggacacaatattgtgcagcca
acagatattgaggaaaaccgaactatgctcttcacgattggtcaatctgaagtttacctc
atcagtcctgacaccaaaaaaatcgcgttggagaaaaattttaaggagatatctttttgc
tctcagggtattagacacgtggaccactttgggtttatctgccgagagtcttcaggaggt
ggaggctttcattttgtctgttacgtgtttcagtgcacaaatgaagctctggttgatgaa
attatgatgaccctgaaacaggctttcacggtggctgcggtgcagcagactaaagcacca
gcccagctgtgcgagggctgccccctgcagggcctgcacaagctctgtgaacggatagag
ggaatgaattcttccaaaaccaaactagaacttcagaagcacctgacaacattaactaac
caggaacaagcaatgattttcgaggaggttcagaaattgagaccaagaaatgaacagcga
gagaatgaattgattatttctttcctgagatgtttgtatgaagagaaacaaaaagttcac
atccatattggggagataaagcagacatcacagattgcagcagagaatattggaactgaa
ttaccatctagtgccactcgatttaggctagatatgctgaaaaacaaagcgaagagatct
ttaacagagtctttagaaagtattttgtcccggggtaataaagccagaggcctgcaggaa
cattccaccagtttggatctggacagctccatgtctagcacattaagtaacaccagcaaa
gagccatctgtgtgtgaaaaggaggccttgcctgtctcggagtcctccttcagggtcctc
ggctcctcagatgacctgtccagtgactcggagggccattccgcagaagagccagccccg
ctctcaccccagcagggtttcagaaggcgtgcaaacaccctgagtcatttccccgtggag
tgccagcaacctccggaacctgctcaggggtctccaggggtctcgcagagaaaactgatg
aggtatcactcagtgggcacagagacgcctcatgaacgaaatgggaatcatccacctgtt
ggcgagtctaaaagttgctcaggtccttcagctcctgctcctccacctcgtcttaacccc
tccgcctcctcaccaaatttttttaagtacctaaaacataactcgagtggagaacaaagt
gggaatgctgtgccaaagagcatctcctaccgtaatgccctgcggaaaaaacttcattct
tcttcctctgtgccaaattttctaaaatttctggcgcctgtagatgaaaataacacctct
gactttatgaacacaaaaagggattttgaatccaaagccaaccatcttggtgaggccatt
gggacctctgtaaagacacggagacactcatggaggcagcagatatttctccgagtggca
accccacagaaagcgtgtgactcccccagcagatatgaagattactctgagctgggagag
cttcccccgcgatctcctttagaaccagtttgtgaagacagaccctctggccctgtgctg
gaggaaaagaaaaggacacctcgcgagcttcgagaactatggcaaaaagcgattctacaa
cagatactcctcctcaggatggagaaggaaaaccagaagctgcaagcctctgaaaatgat
ttgctgaacaagcgcctgaagcttgattatgaagaaatcactccctgtcttaaagaagta
acagcagtgtgggaaaagatgcttagcactccaggaagatccaaaattaagtttgacatg
gaaaaaatgcactcggctgtggggcaaggtgtgccacgtcatcatcggggtgaaatctgg
aaattcctagcagagcaattccaccttaaacaccagcttcccagtaaacagccaaaggac
acgccgtacaaagaactcctaaaacagctcacctcccagcagcatgcgattcttatcgac
cttgggcgaacctttccaacacatccgtacttctcggcccagctaggagcagggcagctg
tcactttacaacattttgaaggcctactcacttctagaccaagaagtaggatattgccaa
ggcctcagctttgtggcaggcattttgctgcttcacatgggtgaagaggaggcgtttcac
atgctcaagtttctgatgtttgacaggggactgcggaaacagtaccggccggacatgatt
attttacagatccagatgtaccagctctccaggctccttcacgattaccacagagacctc
tacaaccaccttgaggagcacgagatcggccccagcctctatgccgccccctggttcctc
accgtgtttgcgtcccaattcccactgggatttgtggccagagtctttgatatgatcttt
cttcagggaacagaggtcatatttaaagtggctttaagtctgttgggaagccataagccc
ttgattctgcagcatgaaaacctagaaactatagttgactttataaaaaacacactaccc
aacctgggcttggtgcaaatggaaaagaccatcaatcaggtgtttgagatggacatctct
aaacagctacaagcttatgaggttgagtaccacgtgcttcaagaagaactcatcgattcc
tctccactcagtgacaaccaaagaatggacagattagagaaaaccaacagcagcttacgc
aaacagaaccttgacctcctcgaacaactgcaggtggcaaatggtaggatccaaaacctc
gaagccacagttgagaagcttctgactagtgaaagcaagctgaagcaggcggccctggcc
ttagagctggagaggtcagcgctgctgcagacggtggaggagcttcagaggcggactgca
gagctgggcggtccacagcccgacctcacactgccccagcccacgggcgactga
DBGET
integrated database retrieval system
