Rhinolophus ferrumequinum (greater horseshoe bat): 117022956
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Entry
117022956 CDS
T07722
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04659
Th17 cell differentiation
rfq04710
Circadian rhythm
rfq05017
Spinocerebellar ataxia
rfq05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117022956 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
117022956 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
117022956 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117022956 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117022956 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rfq03310
]
117022956 (RORA)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117022956 (RORA)
Nuclear receptors [BR:
rfq03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117022956 (RORA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117022956
NCBI-ProteinID:
XP_032963115
Ensembl:
ENSRFEG00010011929
LinkDB
All DBs
Position
6:48739926..49428175
Genome browser
AA seq
541 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGADAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGLSVP
VSIEGTERRGQAAGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
SNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQK
HRMQQQQRDHQQQPGEAEPLTPTYNMSANGLTELHDDLSNYIDGHTPEGSKADSAVSSFY
LDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISK
SHLETCQYLREELQQITWQTFLQEEIENYQSKQREVMWQLCAIKITEAIQYVVEFAKRID
GFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISF
VFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHR
EDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQID
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggcgcg
gacgcggccgccggctccagggagaccccgttgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagaggcttatcagtgcca
gtatccattgaggggactgagagaagggggcaagctgcaggtatctcagtaacgaagaag
acacatacatctcaaattgaaattattccatgcaagatctgtggagacaaatcatcagga
atccattatggtgtcattacatgtgaaggctgcaagggctttttcaggagaagtcagcaa
agcaatgccacctactcgtgtcctcgtcagaagaactgtttgattgatcgaaccagtaga
aaccgctgtcaacactgtcgattacagaaatgccttgccgtagggatgtctcgagatgct
gtaaaatttggccgaatgtcgaaaaagcaacgagacagcttgtacgcagaagtgcagaaa
cacaggatgcagcagcagcagcgagaccaccaacagcagcctggagaggccgagccgttg
actccgacctacaacatgtcagccaacgggctgacggaacttcacgacgacctcagcaac
tacattgacgggcataccccggagggcagcaaggcggactcagccgtcagcagcttctac
ctggacatacagccttccccggaccagtcaggtcttgatatcaatggaatcaaaccagaa
ccaatatgtgactacacaccagcatcagggttctttccctactgttctttcaccaatgga
gagacttccccaactgtgtccatggcagaattagaacatcttgcacagaatatatctaaa
tcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtggcagacc
ttcctgcaggaggagattgagaactatcaaagcaagcagcgggaggtaatgtggcagttg
tgtgccatcaaaatcacagaagcgatacagtatgtggtggagtttgccaaacgcattgat
ggatttatggaactgtgtcaaaacgatcaaattgtgcttctcaaagcaggttctctagag
gtggtgtttatcagaatgtgccgtgccttcgactctcagaacaacaccgtgtactttgat
gggaaatatgctagccccgatgtgttcaaatccttaggttgtgaagactttattagcttt
gtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaatagcattg
ttttctgcatttgtactgatgtcagcagatcgctcgtggctgcaggaaaaggtaaaaatt
gaaaaactgcaacagaaaattcagctagctcttcaacacgtcctacagaagaatcaccga
gaagacggaatactaacaaagttaatatgcaaggtgtctacattaagagccttatgtgga
cgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcgacttcat
tttcctccattatacaaggagttgttcacttcagaatttgagccagcaatgcaaattgat
gggtaa
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