Rhinolophus ferrumequinum (greater horseshoe bat): 117023341
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Entry
117023341 CDS
T07722
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04350
TGF-beta signaling pathway
rfq04919
Thyroid hormone signaling pathway
rfq05016
Huntington disease
rfq05169
Epstein-Barr virus infection
rfq05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117023341 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117023341 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117023341 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117023341 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
117023341 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117023341 (SIN3A)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117023341 (SIN3A)
REST complex
117023341 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117023341 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
117023341
NCBI-ProteinID:
XP_032963816
Ensembl:
ENSRFEG00010017915
LinkDB
All DBs
Position
6:complement(99785050..99849814)
Genome browser
AA seq
1275 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRLPGSTEPFPHQHRVLAPAPPVYEAVSDTMQSAAGIQYSVTP
SYQVSAVPQGSSGSHGPTIAAVHSSHHHPAAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQ
RLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPPPQPTPQHPSQPSAQSAPAPV
QPAPQPPPAKVSKPSQLQAHTAASQQTPPLPPYASPRSPPVQPHTPVTVSLATAPSLQNN
QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY
AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQR
PSQNGCQIRRHSGTGTTPPVKKKPKLLNLKDSSMADASKHGVGTESLFFDKVRKALRSTE
AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERA
TEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFV
SSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNSLG
GTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWR
EQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLS
LAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEE
EEEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRL
HQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDY
YPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICV
QVTDLYLAENNNGATGGQLNTQTSRNLLESAYQRKAEQLMSDENCFKLMFIQSQGQVQLT
IELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLTRKPVFLPRNLRRIRKCQR
GREQQEKEGKEGNSKKSMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQS
HERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVS
INKYRVKYGTVFKAP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgtttggatgaccaggagtcaccagtgtacgcagcccagcagcgccggctc
cctggcagcacagagccctttcctcaccagcaccgggtgctggcccccgccccgcccgtg
tatgaggccgtgtccgacaccatgcaatcagccgctggcatccagtactctgtcactccc
agctatcaggtttcagctgtgccgcagggctccagtggcagccatgggcccaccatagca
gcggtgcacagcagccatcatcacccagcagccgtgcagcctcacggaggccaggtggtc
cagagtcacgctcacccagccccacctgtcgcaccagtgcagggacagcagcagtttcag
aggctcaaggtggaggatgcgttgtcctatcttgaccaggtgaagctgcaatttggtagt
cagcctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcatt
gacactccaggagtgataagtcgtgtgtcccagctgttcaaaggccaccctgacctcatc
atgggcttcaataccttcctgccccccggctacaagatcgaggtgcagaccaatgacatg
gtgaacgtcacgaccccaggccaggtgcaccagatccccacccacggcctccagcccccg
cctcagccaacaccccagcatccttcccagccttcagcccagtcagccccagctcctgtc
cagccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacat
actgcagccagtcagcagactcccccactcccaccatacgcgtccccacgttctccacct
gtccaacctcacacaccagtgacggtctcattggcaacggccccatccttgcagaacaat
cagcctgtggagtttaatcatgccatcaactatgttaataagatcaagaacaggttccag
ggccaaccagacatctacaaagcattcctggagattttgcacacgtatcagaaagagcag
cggaatgccaaggaagctggaggaaactacactccagcactgactgagcaggaggtttat
gcccaggtggctcgtctgtttaaaaatcaggaagatctgttgtcagagtttggacagttc
ttaccagatgccaacagctcagtgcttttaagcaaaacaactgctgagaaggttgattct
gtgaggaatgatcacggaggcactgtgaagaagccccaactgaacaacaagccacagagg
cccagccagaacggctgccagatccgtaggcactctggcacagggaccacccccccggtg
aagaagaaacccaaactgcttaacctgaaggattcttctatggcagatgccagcaagcat
ggtgtaggaactgaatcattattttttgataaggtccgcaaggcgctgcggagcacggag
gcctacgagaacttcctgcgttgtcttgtcatctttaaccaagaggtgatctctcgggct
gagcttgtgcagttagtctctcctttcctggggaaattccctgaactgtttaactggttt
aaaaactttctgggctataaggagtctgtacatctggaaacctttccaaaggaacgagcc
acagagggcattgccatggagatagattatgcctcttgtaaacggttgggttccagctac
cgagccctcccaaagagttaccagcagcccaagtgtacaggacggactcctctctgtaaa
gaggttttaaatgatacctgggtttccttcccttcctggtctgaggactccacctttgtt
agttccaaaaaaactcagtatgaagaacatatctatcgttgtgaagacgaacgctttgag
cttgatgtagttttagagaccaatctggcaacaatccgggttctggaagcaatacagaag
aagctttcccgcttgtctgctgaggaacaagccaaattccgcttggacaacagccttggg
ggcacatcggaagtcatccatcggaaagcactgcagaggatctacgctgacaaagcagct
gacattattgacgggctgaggaagaacccctccattgccgtccccattgtccttaaaagg
ttgaagatgaaagaggaagaatggcgagaagctcagaggggctttaataaggtgtggaga
gagcaaaatgagaaatactatttgaagtctctggaccaccagggcatcaactttaaacag
aacgacaccaaggtgctgaggtctaagagcttactcaacgagattgagagcatctatgac
gagcggcaagagcaggccacggaggagaatgctggtgtgcccgttggcccgcacctctcg
ctggcctatgaagacaaacagatcctggaggatgccgcggctctgatcatccaccacgtg
aagaggcagacaggcattcagaaggaggacaagtacaaaatcaagcaaatcatgcaccat
ttcattccagacctgctctttgctcagaggggtgatctctcagatgtggaagaagaggaa
gaagaggaaatggatgtggacgaagccacaggagcagctaagaagcacaacggtgttgga
ggcagccccccgaagtccaagctgctgtttagtaacacagcagcgcagaagctcagaggg
atggatgaggtgtacaacctcttctatgtgaacaacaactggtatatctttatgcggctg
caccagattctctgcctcaggctcctgcggatttgttcccaagcggaacggcagatcgaa
gaggaaaaccgagagcgagagtgggaacgggaagtgctgggcataaagcgagacaaaagc
gacagccctgccatccagcttcgtctcaaagaacctatggacgtggatgtggaggactat
tacccggctttcctggacatggtgcgtagcctgctggacggcaacatcgactcgtcccag
tacgaggactcgctgcgggagatgttcaccatccatgcctacatcgccttcaccatggac
aagctcatccagagcatcgtccggcagctgcagcacatcgtgagtgatgagatctgtgta
caggtgactgacctatacctggcagaaaataacaacggggccactggaggccagctgaac
acgcagacctcgaggaatctcctggagtcagcgtatcagcggaaggcagagcagctcatg
tcggatgagaactgctttaagcttatgttcattcagagccaaggccaggttcagctgacc
attgagcttttggacacagaagaggagaactcggatgacccagtagaagcagagcgctgg
tcagactacgtggagcgatacatgaattccgatactacctctcctgagcttcgtgagcat
ctcactcggaaaccagtatttctcccacggaaccttcggaggatccggaagtgccagcgt
ggtcgagaacagcaggaaaaggaagggaaggaaggcaacagcaagaagagcatggagaat
gtggatagcctggataagctggagtgtaggttcaagctgaactcctacaagatggtgtat
gtgatcaagtctgaggactacatgtatcggaggaccgccctgctccgggcccatcagtct
catgagcgtgtaagcaagaggctccatcagaggttccaggcctgggtagataaatggacc
aaggagcatgtgccccgtgaaatggcagcagagaccagcaagtggctcatgggtgagggg
ctggagggcctggtgccctgtaccaccacctgtgacacagagaccctgcattttgtcagc
attaacaagtaccgtgtcaagtacggcaccgtgttcaaagccccgtaa
DBGET
integrated database retrieval system
