Rhinolophus ferrumequinum (greater horseshoe bat): 117023426
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Entry
117023426 CDS
T07722
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117023426 (NRDE2)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117023426 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_2
HAT_Syf1_CNRKL1_C
TPR_12
IHABP4_N
TAF4
Motif
Other DBs
NCBI-GeneID:
117023426
NCBI-ProteinID:
XP_032964018
Ensembl:
ENSRFEG00010009498
UniProt:
A0A671EUJ1
LinkDB
All DBs
Position
6:11738088..11775819
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AA seq
1169 aa
AA seq
DB search
MWPGTAVRPVIMALFPAFAGVSEAPDSGSSRKELDWLSNPSFCVGTITSLSQQTEGATAL
ASEGSPLTRSPLKSEPSDESDTNEKLKQASRKKKKEKKKKRKHQHHRKTKRKHGQSSSSG
SEFDTDSEKDQLSRSRDSKKESEKVNQEKAAAADIGHCFIWLEDIQALTGETFRTDKKPD
PANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASTEKKRSHKHAERYFTKKNVG
LMKVDGVAISRKTEPPSSEPVSFIPVTGSDDVVPSVTTWLNPLGIYDQSTTQWLQGQGPS
EQESKQPDSQTDRENVLLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEE
GGQEKRKRSLKLVLEKKLAILERAIESNQSSVDLKLAKLQLCTEFWEPSTLVKEWQKLIF
LHPNNTALWQKYLLFCQSQFSTFSVSKIHSLYGKCLSTLSAVKDGSILSHPELPGTEEAM
FALFLQQCHFLRQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPR
AGEKGARGWRAWMHQQERGGWVAVSPDDDDDDPEGDEQEIRDKTLPRWQVWLAAERSRDQ
RHWRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSQELQFQLIAAFLQFLGVPSG
FGPPASCLYLAMDENSIFDNGLCDEKPLTSLNLSYSGVSCVGRTDQLGCWRWTKGHNREG
EEFIRNIFHLVMPLFSGKEKSQLYFSWFQYEMAKVIWCLHTKNKKRLKSQGKNCKKLAKN
LLKEPENRNNFCLWKQYAHLEWLLGNTEDARKVFDTALSLAGSKDHELCELSLLYAELEV
ELWSDLRGAPPARAVHVLTRLTENGPYGPFTGPVLAVHILKARKAYEHALQDCWGESRVS
DPATRSRLISLAKCFMLFQYLTVGIEAAARVYEQVFAKLKGCDAPEGPGLEDSASPQSVG
GVLEAVTLMHTSLLRFHSRVSVCPLAPLREALSQALKLYPDNQALWRSYVQVQSKSHDAS
KTRRFFDAITRSTKSLEPWLFAIEAEKMRKRLVETVQRVDGREVHTTIPETGLTHRIKAL
FENAIRSDNGGQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYMDAVDYFPD
EMQVVLDLMTEKELRVRLPLEELELLLED
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgggaacggcggtgcggcctgtcatcatggcgctgtttccggcctttgctggc
gttagtgaggctcccgatagcgggagctccaggaaagaattagactggctgagcaaccca
agcttttgtgtgggaaccataacatctctgagccagcaaaccgaaggggccacagctctt
gcttctgaagggtcgccactgacaaggagtcctctgaagtcagagccttcagatgaaagt
gacactaacgaaaaactcaaacaagcaagcagaaaaaagaagaaagagaaaaagaagaaa
aggaagcatcaacaccacaggaaaaccaagagaaaacatgggcagtcaagtagcagtggc
tctgagttcgatactgattctgaaaaggaccagttgtccagaagcagagacagtaaaaaa
gaatcagagaaagtgaatcaagaaaaagctgctgctgctgatattggacattgctttatt
tggcttgaggacattcaggctctgacaggagaaaccttcagaacagataagaaaccggat
cctgcaaactgggagtataagtcgctctaccgaggagatatagcaagatacaagaggaaa
ggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggaaggggcttcc
acagaaaagaagcgttcccacaagcacgccgagcgctattttacgaagaagaacgtggga
ttgatgaaggttgacggagttgccatcagcagaaaaaccgaacctccctcatctgagcca
gtctcgtttatcccagtgacgggctccgacgatgtggtcccttctgttacaacctggttg
aaccctctggggatctatgatcagtccaccacgcagtggttacaaggacagggtccttca
gagcaagagtcaaagcagccggactcacagacagacagagagaacgtgcttctcaaggcc
aaggtggaggagttcaacaggagggttcgggagaatccgcgggatattcagctgtggatg
gcgtttgttgctttccaggatgaggtcatgaaaagtccgggcctgtatgccatcgaggaa
ggggggcaggaaaagcggaagaggtccctgaagctcgttctggagaagaagctggccatc
ctggagcgggccattgaaagcaaccagagcagtgtggatctgaaactcgccaagctgcag
ctctgcaccgagttctgggaaccctccacgctggtcaaggagtggcagaaactgatattc
ctacatcccaacaacacagccctttggcagaagtaccttttattttgccagagccagttt
agcaccttttcagtatcaaaaattcacagtctttatggaaagtgcttgagcactttgtct
gctgtgaaggatggcagcatcctgtcccaccctgagttgcctggcaccgaagaggccatg
tttgcactctttcttcagcagtgccacttcctgcgccaggctggccactcggagaaggct
gtctctctgttccaggccatggttgacttcaccttcttcaaacctgacagcgtgaaagat
ttgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagccccgg
gccggggagaagggcgcccgaggctggagagcatggatgcaccagcaggagcggggcggc
tgggtggccgtcagtccagatgacgacgacgatgaccccgagggtgatgaacaggaaatc
agagacaagacgctgcccaggtggcaggtgtggcttgctgctgagcggtcccgagaccag
aggcactggcggccgtggcgccctgataagaccaagaagcaaactgaggaagactgtgag
gatcccgagaggcaggtgttgtttgacgatattggacaatccctaatccgactttccagc
caagagcttcagtttcagctgattgcagcctttctgcagttcttgggtgtgccttctggg
ttcggccctccggcctcctgcctctatctggccatggatgagaacagcatcttcgataat
ggactttgtgatgaaaaaccattgacttctctcaacctgtcatattctggcgtcagctgt
gttggccgcacggaccagttgggctgctggcgctggaccaagggtcacaaccgagagggc
gaggaattcatccgtaacattttccaccttgtgatgcctttgttttcaggcaaggagaaa
tctcagctgtacttctcctggttccagtacgagatggcaaaggtcatttggtgtctgcac
actaaaaacaagaagagattaaagtcacaaggaaagaattgcaaaaagctagccaagaat
ctccttaaggagccagaaaaccgtaataatttttgcctctggaaacagtatgcacatctg
gagtggttgcttggcaacacagaggacgccaggaaagtgttcgatacagcactcagcctg
gcagggagcaaggaccacgaactctgtgaactcagtctgctttacgctgaactggaggtg
gagctatggtcagacctcaggggcgcccccccagcccgagctgttcacgttttgaccaga
ctgactgagaacggcccctatggaccctttaccgggccagtgttggccgtgcacattctg
aaagctcggaaggcttatgagcacgcactgcaggactgttggggtgagagccgtgtctcc
gatccagctacccgtagtcgcctgatcagcttggccaaatgctttatgctcttccagtat
ctgactgtagggatcgaggctgctgcgcgtgtgtacgagcaggtatttgcaaaactgaag
ggctgtgatgcccccgaaggccccggcctggaggacagcgccagcccccagagtgtgggc
ggtgtcctcgaggccgtcacactgatgcacaccagcctgctcagatttcactccagagtc
agtgtctgccctctggctcctctgcgagaggcgctctcccaggctttaaagttgtacccg
gacaaccaggctctttggaggtcctatgtgcaggttcagagtaagtcccacgatgccagt
aagaccagaagattcttcgatgccatcaccaggtctacgaaatccttggagccttggctg
tttgcaattgaagctgagaaaatgaggaaaagactggtggaaacggttcagagggtagat
ggcagagaggtccacaccacaattcctgagactggcttgacacatcggatcaaagccctg
tttgaaaatgcgatacggagtgacaacggcggccagtgccccttactgtggaggatgtat
ttgaattttttggtttccttaggaaataaagaaagaagtaaaggtgtgttctacaaagca
ctgcagaattgtccttgggcaaaggtgttgtacatggacgccgtggactacttccccgat
gagatgcaggtggtcctggacctgatgaccgagaaggaactccgagtgcgcctgcccctg
gaggagctggagcttctgcttgaggactag
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