Rhinolophus ferrumequinum (greater horseshoe bat): 117023445
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Entry
117023445 CDS
T07722
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117023445 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117023445 (APEX1)
Enzymes [BR:
rfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117023445 (APEX1)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117023445 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117023445
NCBI-ProteinID:
XP_032964055
Ensembl:
ENSRFEG00010016700
UniProt:
A0A671FHB1
LinkDB
All DBs
Position
6:71618237..71621006
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AA seq
317 aa
AA seq
DB search
MPKRGKKAAVVEDGEEPKTEPEAKKSKAGAKKNEKEAGEGPVLYEDPPDKKTSPSGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDTFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPEERQGFG
ELLQAVPLTDSFRHLYPSTAYAYTFWTYMMNARSKNVGWRLDYFLVSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaaggcagcagtggtagaagatggggaagagcctaagactgag
ccagaggccaagaagagcaaggcgggagcaaagaaaaacgaaaaagaggcaggagagggg
ccagtcctgtatgaggaccccccagataagaaaacctcacccagtggcaaatcagccaca
ctcaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggttta
gattgggtaaaggaagaagccccagatatcctgtgcctgcaagagaccaaatgttcagag
aataaactaccagctgaacttcaagagcttcctggactgtcccatcagtattggtcagct
ccttcagataaggaagggtacagtggtgtgggcctactctcccgccagtgcccactcaaa
gtctcctatggcattggcgaggaggaacatgatcaggaaggccgagtgattgtggctgaa
tttgacacatttgtgctggtaacagcctatgtacctaatgcaggccgaggtctggtgcgc
ctggagtaccggcagcgctgggatgaagcttttcgcaagttcctgaagggcttggcttcc
cgcaagcctcttgtgctatgtggggacctcaatgtggctcatgaagaaattgaccttcga
aaccccaagggaaacaaaaagaatgctggcttcactccagaagagcgtcaaggctttggg
gaattgctgcaggctgtgccactgactgacagtttccggcacctctaccccagcacggct
tatgcctacaccttttggacctatatgatgaatgctcgatccaaaaacgttggttggcgc
cttgattactttttggtgtctcactctttgttacctgctttgtgtgacagcaagatccgt
tccaaggccctgggcagtgaccactgtcccatcaccctatacctagcactgtga
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