Rhinolophus ferrumequinum (greater horseshoe bat): 117023457
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Entry
117023457 CDS
T07722
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfq03041
]
117023457 (PRPF39)
Spliceosome [BR:
rfq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117023457 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_12
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
117023457
NCBI-ProteinID:
XP_032964093
Ensembl:
ENSRFEG00010007319
UniProt:
A0A671EGE2
LinkDB
All DBs
Position
6:91169759..91201177
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AA seq
667 aa
AA seq
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MQNSHMEEYRNSSNGGPGNSSEVVVEQSADFSTEIMNVTEMEQSPVGSPNVNATTEENEI
ANAVDLPVTETETNFPPDYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDS
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGDQFIQLRRELASVNGHSGDDGPPGDDMPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EMENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNFAKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILSCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggaggagtacagaaattctagtaatggcggcccaggcaacagt
tcagaggtagtggtagaacagtctgctgattttagtactgaaattatgaatgttacggaa
atggaacagtcacctgttggatctcctaatgtgaatgcaactacagaagaaaacgaaata
gcaaatgctgtggaccttccagtgacagaaacggaaacaaatttccctccagactatgaa
aaattttggaaaactgtagaaaataatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccagaaaagcatttgacaaatttttc
atacactacccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacat
gacaacattaaacagtcagatgaggtgtatcggcgtgggcttcaggcaatacctcttagt
gttgacctctggatacattatataaacttcttaaaagaaacgttggaccctggagattct
gagacaaacagtacaattagaggaacttttgagcatgccgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggagaatgaacagggaaacttg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctcgagatcttctaactggc
gaccagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggagatgat
ggtccccctggtgatgatatgccatcgggaattgaagacataaccgatccagcaaagcta
attaccgaaatagaaaacatgaggcatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactcaaaaactggaaagaatacttagaattt
gaaatggaaaatgggactcacgaacgagttgtggttctctttgaaagatgcgtcatttca
tgtgctctctatgaggagttttggatcaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacgtcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgaatcatcgttttatgctatcaaactagcccgacatctt
ttcaaaatacagaaaaactttgcaaaatcaaggaaggtgcttttggaagcaattgaaaga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatattctaagttgttttgacaaagctatacatggttcattacct
attaaaatgagaattacgttttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaacgcttatgatgaacatcaaacactcctaaaagagcaggat
tctttaaaaaggaaagcggaaaatggatcagaagaaccagaggaaaagaaagcacacaca
gaagacacaacttcatcatctacacaaatgattgatggtgatttacaggcaaatcaagca
gcatataactatagtgcttggtatcaatacaattaccagaatccttggaattatggacag
tattatccgccccctccaacttga
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