Rhinolophus ferrumequinum (greater horseshoe bat): 117023587
Help
Entry
117023587 CDS
T07722
Symbol
STRC
Name
(RefSeq) stereocilin isoform X1
KO
K24636
stereocilin
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rfq03037
]
117023587 (STRC)
Cilium and associated proteins [BR:
rfq03037
]
Other cilia and associated proteins
Stereociliary proteins
117023587 (STRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
SRCR_2
ALTTAQ_rpt
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
117023587
NCBI-ProteinID:
XP_032964441
Ensembl:
ENSRFEG00010004480
LinkDB
All DBs
Position
6:62228197..62244751
Genome browser
AA seq
1763 aa
AA seq
DB search
MALSLWPLLLLLSCAVTLAPAGSLDPGLSLLKSLLSTLDQAPRGSLSRSRFSAFLANISS
NFEPGRMGEGPVGEPPPLQPPALRLHDFLLTLRGSPDWEPMLGLLGDVLALLGQEQTPRD
FLGHQAGVLGGLAEVLLGALVPGGPPSPTRPPCTRDGPPDCVLVADWLPSLLLLLEGTRW
QALVQVQPSVDLTNVTGLDGREPAPHLLQGLLALLTPVEELSSEEALWGGLLRTVGAPLY
AAFQEGLLRVTDSLQDEVFSLLGQPEPDANGQCQGGNLQQLLLWGVRHNLSWDVQELGFL
SGSPPPPPALLHCLSTGVPLPRTSQPSAHIRPRQRRAISVEAICENHSGPAPPYSISNFS
IHLLCQLTKPATPQPPPSITAICQTAVWYAVSWAPGAQGWLQACHDQFPDQFLEAICSNL
SFSALSGPNRRLVKRLCAGLLPPPTSCPDGLPPVPVTPEIFWGCFLENETLWAERLCGDA
NLQAVPPSNQAWVQHVCQGPTPDITAFPPCHIGPCGERCPDGGNFLMMVCANDTLYEALV
PFWPWLAGQCRISRGGNDTCFLDGLLGPLLPSLPPLGPSPLCLAPGPFLLGMLSQLPRCQ
SSVPVLAHPTRLHYLLRLLTFLLGPGAGGTEAQGMLGQALLLSSLPDNCSFWDAFRPEGR
RSLLRTVGEYLEQEEQPTSLDFELSDSSSSGIGKMELLACFSPVLWDLLQREKSVWVLQI
LMQAYLHMPPENLQQLVLSAEREAAQGFLTLMHRSWAQLQVPPSEEQALGRLTALLLQRY
PRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIRDYSPEMRPEQKEALARRLL
APELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALEDSWPAAGLGPGHARHVL
RSLVNQSVQDGEEQVRRLGPLACFLTPEELQSLVPLNDPMGPVERGLLECAANGTLSPQG
RVAYELLGVLRSSGGTVMSPRELRVWAPLFPQLGLRFLQELSEPQLRAMLPALQGTSVTP
AQAVLLLRRLLPRHELSLEELCSLHPLLPGLSSQTLQAIPRRVLVGACSCLAPELSRLSA
CQTAALLQTFRVKDGVKSMGTSAGAAVCIPGQPVPTTWPECLLPLLPLKLLQLDSAALLA
DRRRYRDLPWSEQQAQFLWKKMQVPSNLTLRNLQALGTLAGGMSCKFLQQINSMADFLEV
MHMIYQLPTGVRGSLRACIWAELQRRMTMPEPELATLGPELSGLDTKLLLDLPVRLMDRL
SNESIMLVVELVRAAPEQLLALTPLHRAALAEKALQNLAPKETTVSREVLETLGPLVGFL
GMESTRRIPLQILLAHLSQLQGFCLGEPFATELGWLLLQEPILGKPELWSQDEVEQAGRL
VFTLSTEAISLIPREALGPETLERLLEKQQSWEQSRAGQLCGGPQLSSKKAALVAGVVQP
TVDYLPEPVPNCADIRGTFPAAWSATQIAEMELSDFEDCLALFAGDSGLGPEELRAAMGK
AKQLWGPPRGFRPEQILQLGRLLIGLGERELQELILVDWGVLSTLGQIDGWSSIQLRVVV
SSFLRQSGRHMSHLDFLHLTALGYTLCGLRPEELQHISSWEFSQAALFLGNLHLQCSEEQ
LEVLAQLLVLPGGFGPVSNWGPEIFTEIGTIAAGIPDLALSALLAEQIQGLTPLAISVIP
APKFAVVFSPTQLSSLTSVQAVAVTPEQMAFLSPEQRRAVAWAQHEGMESPEQQDRSTAW
GLQNWSRPSWALVLTICFLGNLL
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagcctctggcccctactgctgctgctgtcctgtgcagtgactctggcccct
gcaggctccctggaccctggtctctcccttctgaagtcattgctctccactctggaccag
gctccccgggggtccctcagccgctcacggttctctgcattcctggccaacatttcttct
aactttgagcctgggagaatgggggagggaccagtgggagagcccccaccactccagccc
cctgccctccggctccatgatttcctactgacactgagaggcagcccagactgggagcca
atgctagggctgctcggggatgtgctggcactgctgggacaggagcagaccccccgcgac
ttcctggggcaccaggcaggtgtgctgggtggactcgcagaggtgctgctgggagcctta
gttcccgggggaccccctagccctacccggcccccatgcacccgcgatggtcctcccgac
tgcgtcctagtggctgactggttgccttctctgctgctgctgttagaaggcacacgctgg
caggccttggtgcaggtgcagcccagtgtggacctcaccaacgtcacaggcctggacggg
agggagccagccccccaccttttacagggtctgttggctttgctcacccccgtggaggag
ctgagctctgaggaggctctttggggaggtctgctgcgcacagtgggggcccccctctat
gctgccttccaggaggggctgctccgtgtcacggactccctgcaggatgaggtcttttcc
cttctggggcaaccagaacctgatgccaatgggcagtgccagggaggcaacctacagcaa
ctgctcttatggggcgtccgtcacaacctttcctgggacgtccaggagctgggctttctg
tctggatcaccccccccaccccctgccctcctccactgcctgagcacgggtgtgcctctg
cccaggacttcccagccctcagcccacatccgccctcgccaacggcgagccatctctgtg
gaggccatctgcgagaaccactcgggcccagcaccaccctacagcatttccaacttctcc
attcacttgctctgccagctcaccaagcctgccaccccgcagcccccgcccagcatcact
gccatctgccagacagctgtgtggtatgcagtctcgtgggcaccaggtgcccagggctgg
ctacaggcctgccatgaccaatttcctgatcagttcctggaggcaatctgtagcaacctc
tccttttcagccctgtctggccccaaccgccgcctggtaaagcggctctgtgctggtctg
cttccaccccccaccagctgccctgacggcctgccccctgttcctgtcaccccggagatc
ttctggggctgcttcttggagaatgagactttgtgggctgagcggctgtgtggggatgcg
aatctgcaggctgtgccccccagcaatcaggcttgggtccagcatgtgtgccagggcccc
accccagatatcactgccttcccaccctgccacattggaccctgtggggaacgctgccca
gatgggggcaatttcctgatgatggtctgtgccaatgacactctgtatgaggccctggtg
cccttttggccctggctagcaggccagtgcagaataagtcgtgggggcaatgacacttgc
ttcctagacgggctgctgggccctcttctgccctctctgccaccactgggaccatcccca
ctctgcctggctccaggccccttcctgcttggcatgctatcccaattgccacgctgtcag
tcctctgtgccggtccttgcccaccccacacgcctacactatctccttcgcctgctgacc
ttcctcctgggtccaggggccggagggacagaagcccaggggatgctgggccaggcccta
ctgctctccagtctcccagacaactgctccttctgggatgccttccgcccagagggccgg
cgcagtttgctgcggacagttggggaatacctggaacaggaggagcagccgacctcactg
gactttgaactcagtgacagctccagctctggtataggcaagatggagctgctggcctgc
ttcagccctgtgctgtgggatctgctccagagggagaagagtgtttgggtcttgcagatt
ctaatgcaggcatacctgcacatgcccccagaaaatctccagcaactggtgctttcagca
gagagggaggccgctcagggcttcctgacgctcatgcaccgttcctgggctcagctgcag
gtaccaccatctgaggagcaggccttgggtcgcctgacagccttgctgctccaacgttac
ccacgcctcacctcccagctcttcattgacttgtcaccactcatccccttcttggctgtc
tctgatctgatgcgcttcccaccatccctcttggccaacgacagcgtcctggctgctatc
cgggattacagcccagaaatgaggcctgaacagaaagaggctctggcaaggcgactgctg
gcccctgagctgttcggagaagtgcctgcctggccccaggagctgctgtgggcagtgctg
cctctgctccctcaccttcctctagagaactttctgcagctcagtcctcaccagatccag
gccctggaggatagctggccagcagcaggtcttgggccaggacacgcccggcatgtgctg
cgcagcctggtgaaccagagtgtccaagatggagaggaacaggtccgcaggctggggccc
ctcgcctgtttcctgacccctgaggagctgcagagcctggtaccgttgaatgatccgatg
gggccagtagaacgggggctgctggaatgtgcggccaacgggaccctcagcccacaagga
cgggtggcatatgaacttctgggggtgttgcgctcatctggaggaactgtgatgagcccc
cgggagctgcgggtctgggcccctctcttccctcagctgggcctccgcttcctacaggag
ttgtcagagccccagcttagagccatgcttcctgccttgcagggaaccagtgtcacacct
gcccaggctgttctgctgcttagacggcttctcccaaggcacgaactgtccttggaggag
ctttgctccttgcaccctctgttgccaggcctcagctcccagacactccaggccatccct
aggcgagttctggttggggcctgttcctgcctggcccctgaactgtcacgcctctcagcc
tgccagactgcagcactgctgcagacctttcgggtgaaagatggagttaaaagtatgggt
accagtgccggtgcagctgtgtgtatccctggtcagcctgtccccaccacctggccagaa
tgcctgcttcccctgctcccactaaagttgctacaactggactctgcggctcttctggct
gaccgaaggcgctaccgggacctgccctggtctgagcagcaggcacagtttctctggaag
aagatgcaggtgcccagcaacctgaccctcaggaatctgcaggctctgggcaccctggca
gggggcatgtcttgtaagtttctgcagcagatcaactcaatggcagacttcctggaagta
atgcacatgatctatcaactgcccacgggggttcgagggagcctgagggcctgtatctgg
gcggagctacagcggagaatgacaatgccagagccagagctggccaccctggggccagaa
ctgagtgggctagacaccaagctactcctggacttaccggtccggttgatggacagactg
tccaatgaatccattatgttggtggtggagctggtaagagctgctccagagcaactgctg
gcactgaccccactccaccgggcagccctggcagagaaggcactacaaaacttggctcca
aaggagacaacagtctcaagggaagtgctggagactttgggccccttggttggattcctg
gggatggagagcacacgacggatccccctgcagatcctgctggctcacctcagtcagctg
cagggcttctgcctaggagagccctttgccaccgagcttggatggctgctgttacaggag
cctattcttgggaaaccagagctgtggagccaggacgaagtagagcaagctggacgctta
gtgttcactctgtctactgaggcgatttccttgatccccagggaggccttgggcccagag
accttggagcgcctcctagaaaagcagcagagctgggaacagagcagagctgggcagctg
tgtgggggaccacagctctcttccaagaaagcagctctagtagctggggttgtgcagcct
acggtggactatcttccagaacctgtgccaaattgtgcagatatacgggggacgttccca
gcagcctggtctgcaacccagattgcagagatggagctctcagactttgaggactgcctg
gcgttatttgcaggagactcgggacttgggcctgaggaactacgggcagcgatgggcaag
gcgaaacagctgtggggtcccccccggggattccgtcctgaacagatcctgcagctgggt
cggctcttaataggcttaggagagcgggaactacaggagctgatcctggtagactgggga
gtgctgagcaccctggggcagatagatggctggagctccatccagctccgggttgtggtc
tccagtttcctgcggcagagtggccggcacatgagccacctggatttccttcacctgact
gcactgggttacacgctctgtggactgcggccagaggagctacagcatatcagcagttgg
gagtttagccaagcagctctcttcctgggcaacctgcatctccagtgctcagaggaacaa
ctggaggttctggcccaactcctcgtcctacctggtggttttggtccagtcagtaactgg
gggcctgagatcttcactgaaattggtacaatagcagctgggatcccagacctggctctt
tcagcactgctggcggaacagatccagggccttactcctcttgccatttctgtcatccct
gctccgaaatttgccgtggtgttcagtcccacccagctgtctagtctcaccagtgttcag
gctgtggctgtcactcctgagcaaatggcctttctgagtcctgagcagcgacgagcagtt
gcatgggcccagcatgaggggatggagagcccagaacagcaggatcgaagcacagcctgg
ggcctccagaactggtcacgaccttcctgggccctggtattaaccatctgcttccttggc
aacctgctatga
DBGET
integrated database retrieval system
