Rhinolophus ferrumequinum (greater horseshoe bat): 117024142
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Entry
117024142 CDS
T07722
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117024142 (NPAS3)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117024142 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
117024142
NCBI-ProteinID:
XP_032965394
Ensembl:
ENSRFEG00010002279
LinkDB
All DBs
Position
6:81438365..82286511
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AA seq
942 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAAANGTPQNVQGITSYQQRLQALRKE
KSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPW
NLRMEGPPPNTSVKGIQMWKSELCMRKPPCEGTQRRRSPSALAIEVFEAHLGSHILQSLD
GFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRG
LLSQGTTEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIK
SSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNM
DLNIIYCENRISDYMDLSPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWM
QKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESS
ETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNTCDNDMNCNEDGHS
SSNPDSRDSEDSFEHSDFENSKAGEDSFGALGPMQIKVERYVESESDLRLQNCESLTSDS
AKDSDSAGEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGGLDAGLVEPPRLLSS
PNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPTSEHFPSPQGSGG
SGGLHVAIPDSVLTPPGGDGAAARKTQFSASATASLAPVASDPLSPPLSASPRDKHPGGG
SSGGGGPSTSNSLLYTGDLETLQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRY
APAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSA
ASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcagccggcggggca
gccgcgggggtgccggccggcgcgggaatggggagggccggagccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgtttacaagcattgagaaaggag
aaatcccgagatgctgctcgctcccgccggggaaaagaaaattttgagttctatgaattg
gccaagttgttgccacttcctgcagccatcactagccagcttgacaaggcgtccatcatt
cgacttacaattagctatctgaaaatgagggattttgctaaccaaggggaccctccgtgg
aacttgcgaatggaaggccctccaccaaacacatcagtaaaagggatacaaatgtggaaa
tctgaactctgcatgagaaagccaccatgtgaaggtacacaacgaaggagaagccccagt
gcactggccattgaagtatttgaagcacacttgggaagtcacattttgcagtccctggat
ggctttgtatttgcactaaatcaagaaggaaaatttttgtacatttctgaaacagtctcc
atctacctaggcctctcacaagtggagctgacaggcagcagcgtctttgactatgtccac
cccggggaccacgtggagatggcagagcagctgggcatgaagctcccgcctgggcggggt
ctcctctcacagggcaccactgaggacggagccagctcagcatcttcctcctcccagtcg
gagacccctgagccagtggagtcaaccagccccagtctgctaaccactgacaacaccctt
gagcgttcctttttcatccgaatgaaatctactctgaccaaacgtggcgtgcacatcaaa
tcttcgggatataaggtgattcacataaccggccggctacgactgcgggtgtcactgtcc
catgggaggactgtccccagccaaatcatgggtcttgtggtcgtggcacatgccttgcct
ccccctacaatcaatgaagtcagaatcgactgccatatgttcgtcactcgagtaaatatg
gacctcaatatcatttactgtgaaaataggatcagtgattatatggatctgagccctgta
gacattgtggggaagagatgctaccacttcatccacgccgaggacgtcgagggcatcagg
cacagtcacttggacttgctgaataagggccagtgtgtgacaaagtactatcgctggatg
cagaagaacggaggctatatttggatacagtctagtgccacaatagctattaatgccaag
aacgcaaatgagaagaacatcatctgggtgaattatcttcttagtaatccagaatacaag
gacacaccaatggatatcgcacagctcccccacctgccggagaaaacttcagaatcctcg
gagacatctgactctgaatcagactctaaagacacctcaggtattacagaggacaacgaa
aactccaagtccgacgagaaggggaaccagtccgagaacagcgaagacccggaacccgac
cggaagaagtcgggcaacacgtgcgacaacgacatgaactgcaacgaggacggccacagc
tccagcaaccccgacagccgcgacagcgaggacagcttcgagcactcggactttgagaac
tccaaggcgggcgaggacagcttcggggcgctgggcccgatgcagatcaaggtcgagcgc
tacgtggagagtgagtcggacctgcggctgcagaactgcgagtcgctcacgtcggacagc
gccaaggactcggacagcgcgggcgaggcgggcgcgcaggcgtccagcaagcaccagaag
cgcaagaagaggcggaaacggcagaagggcggcagtgccagccgccggcgcctgtccagc
gcgtcgagccccggcggcttggatgcgggcctggtggagcccccgcggctgctgtcctcc
cccaacagtgcctcggtgctcaagatcaagacggagatctcggaacccatcaacttcgac
aacgacagcagcatctggaactacccacccaaccgggagatttccaggaacgagtccccc
tacagcatgaccaagccccccacctccgagcacttcccgtccccgcagggcagcgggggc
agcggggggctgcacgtggccatccctgactctgtgctcaccccgcccggcggcgacggc
gcagccgcccgcaagactcagttcagcgcctccgccaccgcgtccttggctccggtggcc
tccgaccctctgtcacccccgctctcggcgtccccacgggacaagcaccccgggggtggc
agcagcggtgggggtggccccagcacatccaactcattgctgtacactggggacctggag
acgctgcagaggttgcaggcgggcaatgtcgtgctcccgctggtgcacagggtgaccggg
accctggcggccaccagcacggccgcgcagagggtctacaccacgggcacgatccgctat
gcgcccgccgaggtgaccctggccatgcagggcaacctgctgcccaacgcgcacgctgtt
aacttcgtggacgttaacagccccggcttcggcctcgaccccaagacgcccatggagatg
ctctaccaccacgtgcaccggctcaacatgtcgggaccgttcggcggcgccgtgagcgcc
gccagcctgacgcagatgcccgccggcaacgtgttcaccacggccgagggactcttctcc
acgctgcccttccccgtctacagtaacggcatccacgcggcacagactctggagcgaaag
gaggactga
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