Rhinolophus ferrumequinum (greater horseshoe bat): 117024483
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Entry
117024483 CDS
T07722
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117024483 (TRIM50)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117024483 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
zf-Nse
Prok-RING_4
TRIM_CC
zf-RING_4
zf-RING_6
Baculo_IE-1
Sina_RING
DUF1644
zf-RING_10
Trm112p
Ninein_long_CC
DUF7575
Motif
Other DBs
NCBI-GeneID:
117024483
NCBI-ProteinID:
XP_032965723
Ensembl:
ENSRFEG00010009207
UniProt:
A0A671EJT1
LinkDB
All DBs
Position
7:complement(93059090..93067076)
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AA seq
487 aa
AA seq
DB search
MAWRLCVQELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSRHLDSGLRCPVCRQEV
DGSSSPPNVSLARVIEALRLPEDPEPKVCAQHRNPLSLFCEKDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAGLISDLKQEEKKVEEHIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGLEGHTRGLMASLDMQLEQARGTRERLVQAERVLEQFGNESHHEF
IRKYHSMASRAELQQARPLEGVFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRCANQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLNKSPEHGVWLIGLKEGRLYEAFGCPRVPLPVAGHPHRIGVYLHY
EQGGLTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPLVLPPPSGPGHLT
PPQPTTL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcggctgtgcgtgcaagagctggaggaccgccttcaatgccccatctgcctc
gaggtcttcaaggagcccctaatgctgcagtgcggccactcctactgcaaaggctgcctg
gtgtccctgtcccgccacctggactccgggctgcgctgccccgtgtgccgacaggaggtg
gatggcagcagctccccgcccaacgtctccctggcgcgggtgatcgaagccctgcggctc
ccggaggacccagagcccaaagtctgcgcgcagcaccggaacccgctcagtctcttctgc
gagaaggaccaggagctcatctgcggcctctgcggcctgttgggctcccaccagcaccac
cgggtcacgcccgtctccaccgtctacagccgtatgaaggaggagcttgcgggcctcatc
tccgacctgaagcaggaggagaagaaggtggaggagcacatcgccaagctggtgaacaac
aggacccggattgtcaacgagtccgatgtcttcagctgggtgatccgccgtgagttccag
gagctgcaccacctggtggacgaggagaaggcccgctgcctggaggggctggaggggcac
acccgtggcctcatggcctccctggatatgcagctggagcaggcccggggcacgcgggag
cggctggtccaagccgagcgtgtgctggagcagtttggtaacgagagtcaccacgagttc
atccggaagtaccactccatggcctccagagcagagctccagcaggcccggcccttggag
ggcgtgttcagtcccatctccttcaaaccaggcctccaccaggccgacatcaagctgacc
gtatggaaaaggctgttccgcaaggttctgccagctccggagtctctcaagctggaccct
gccactgcccaccctctcctggagctctctaagggcaacacggtggtacagtgtgggctc
ctggcccagcgatgcgccaaccagcctgagcgcttcgactacagtacttgtgtcctggcc
agccggggcttctcctgcggccgccactactgggaggtggtggtgggcagcaagagcgac
tggcgcctgggggtcatcaagggcacagccagtcgcaagggcaagctgaacaagtcccca
gagcatggcgtgtggctcattggcctgaaggagggccggctgtatgaggcctttggctgc
cccagggtgcccctgcccgtggctggccacccccaccgcattggggtctatttgcactat
gagcagggagggctcaccttctttgatgctgaccgcccggatgacctacggccgctctac
accttccaggctgacttccagggcaagctctatcccattctggacacatgctggcatgaa
aggggcagcaactcactgcccttggtgctgcccccacccagtgggcccggccacctcaca
cccccacagcccaccacgctgtag
DBGET
integrated database retrieval system
