Rhinolophus ferrumequinum (greater horseshoe bat): 117025147
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Entry
117025147 CDS
T07722
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
117025147 (HCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rfq04040
]
117025147 (HCN1)
Ion channels [BR:
rfq04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117025147 (HCN1)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117025147
NCBI-ProteinID:
XP_032966817
Ensembl:
ENSRFEG00010020144
UniProt:
A0A671FXT3
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Position
7:complement(30049467..30395917)
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AA seq
881 aa
AA seq
DB search
MEGGGKPNSSSNSRDDGNSVFPAKAPATGTGSVVAEKRLGTPPGGGGAGAKEHGNSVCFK
VDGGGGGGEEPVGGLEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQER
VKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVF
LLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMML
LLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAP
VSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
MRQKIHDYYEHRYQGKIFDEENILSELNDPLREEIVNFNCRKLVATMPLFANADPNFVTA
MLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTK
GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQ
KDLNTGVFNNQENEILKQIVKHDREMVQAIAPINYPQMTALNSTSSTTTPTSRVRTQSPP
VYPATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTAVCSPPVQSPLATRTFHYASPTTSQ
LSLLQQQQQQLQQPQPPQTQQQPQQPQTPSSSTPKSEVHKSTQALHNTSLTREVRPLSAS
QPSLPHEVATLISRPHPTVGESLASIPQPVTAVHSTGLQPGGRGTVPQRVTLFRQMSSGA
IPPNRGVPPAPPPPAAALQRESPSVLNTDPEAEKPRFASNL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggcggcaagcccaactcctcgtccaacagccgggacgatggcaacagcgtc
ttccccgccaaggcgcccgcgacgggcacggggtcggtcgtggccgagaagcgcctgggc
accccgccggggggcggcggggccggggccaaggagcacggcaactccgtgtgcttcaag
gtggacggcggcggcggcggcggcgaggagccggtcgggggcttggaggacgccgagggg
ccccggcggcagtacggtttcatgcagaggcagttcacctccatgctgcagcccggggtc
aacaaattctccctccgcatgtttgggagccagaaggcggtggagaaggagcaggaaagg
gttaaaactgcaggcttctggattatccacccttacagtgatttcaggttttattgggat
ttaataatgcttataatgatggttggaaatctggtcatcataccagtgggaatcacattc
tttacagaacaaacaacaacaccatggattatcttcaatgtggcatcagatacagttttc
cttttggacctgatcatgaatttcaggactgggactgtcaatgaagacagttctgaaatc
atcctggaccctaaagtgatcaagatgaattatttaaaaagctggtttgtggttgacttc
atctcatcaatcccagtggattatatctttcttattgtagaaaaaggaatggactcggaa
gtttacaagacagccagggcacttcgcatcgtgaggtttacaaaaattctcagtctcttg
cgtttattacgactttcaagattaatcagatacatacaccagtgggaagagattttccac
atgacgtatgatctcgccagtgcagtggtgagaatttttaacctcattggcatgatgctg
ctcctatgccactgggatggctgtcttcagttcttagtgccactactgcaggatttccca
ccggattgctgggtgtctctaaatgaaatggtgaatgactcttggggaaagcaatattca
tacgcactcttcaaagcgatgagtcacatgctgtgcatcgggtatggagcccaggccccc
gtcagcatgtcagacctctggatcaccatgctgagcatgatcgtgggcgccacctgctat
gccatgtttgtgggccatgccacggcgctaatccagtctttggactcctcaaggcgtcaa
taccaagaaaagtataagcaagtggagcaatacatgtcattccataagttaccagctgac
atgcgtcagaagatacacgattactatgaacacagataccaaggcaaaatcttcgatgag
gaaaacattctcagtgaactcaatgatcctctgagagaggagatagtcaacttcaactgt
cggaaactagtggccacaatgcctctttttgctaacgcggaccctaattttgtgactgcc
atgctgagcaagttgagatttgaggtgtttcagcctggagattacatcatacgagaagga
gctgtgggtaaaaaaatgtatttcattcaacatggtgttgctggtgtcatcacaaaatcc
agtaaagaaatgaagctgacagatggctcttacttcggagagatttgcctgctgaccaag
ggccgccgtactgccagtgttcgagctgatacatactgtcgtctttattcactttctgtg
gacaatttcaatgaagtcctggaggaatatccaatgatgagaagagcctttgagacggtt
gccattgaccgactggatcggataggaaagaaaaattcaattcttctgcaaaagttccag
aaggatcttaacactggtgttttcaacaatcaggagaacgagatcctgaagcagattgtg
aaacacgacagggagatggtgcaggcaatcgctccaatcaattatcctcagatgacagcc
ctgaattccacgtcttcaactactactccgacctcccgcgtgaggacacaatcaccgccc
gtgtacccagcgaccagcctgtctcatagcaacctgcattcccccagtcccagcacacag
accccccagccgtcggccatcctctccccctgctcctacaccactgccgtctgcagccct
cctgtacagagcccactggccactcgaactttccactacgcctccccgactacttcccag
ttgtcacttttgcagcagcaacagcagcaattacagcagccccagccaccgcagacccag
cagcagccccaacagccacagacacccagcagctccacgccgaaaagcgaagtgcacaag
agcacgcaagccctgcacaacaccagcctgacccgagaggtcaggccgctctcagcctca
cagccctcgctgccccatgaggttgccaccctgatttccagacctcatcccactgtgggc
gagtccctggcctccatccctcaacccgtgacagctgtccacagcacaggccttcagcca
gggggcagggggactgtcccccagagagtcaccctgttccgacagatgtcatcgggagcc
atcccccccaaccgaggggttcctcctgcacctcctccaccagcagccgctcttcagaga
gagtctccttcagtcttaaatacagacccagaggcagagaagccacggtttgcttcaaat
ttatga
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