KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117025232
Entry
117025232         CDS       T07722                                 
Symbol
ERCC8
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03420  Nucleotide excision repair
rfq04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117025232 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117025232 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rfq04121]
    117025232 (ERCC8)
   03400 DNA repair and recombination proteins [BR:rfq03400]
    117025232 (ERCC8)
Ubiquitin system [BR:rfq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117025232 (ERCC8)
DNA repair and recombination proteins [BR:rfq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117025232 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_Nup120_160 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 117025232
NCBI-ProteinID: XP_032966957
LinkDB
Position
7:complement(38662081..38697822)
AA seq 360 aa
MLKGSMAMELTTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVDRNHPD
VHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPVATKH
CLVAVGTRGPKXQLCDLKSGSCSHILQGHRQEILAVSWSPRSEYVLATASADSRVKLWDV
RRASGCLITLDQHNGTKSQAVESANTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSS
GENTLVNYGKVXNDSRKGLKFTVSCGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKS
VDCCIFQSNFQELYSGSRDCNILAWVPALYEPVPDDDETTTKSQLNAAFQDAWSSSDEEG
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgttgaaaggatccatggcaatggaattaacaacccttgacattgaacctgtggaaggg
agatacatgttatcaggtggttcagatggtgtgattgtactttatgatcttgagaactcc
agcagacaaccttattacacatgtaaagcagtgtgttctgttgacagaaaccatcctgat
gttcacaaatacagtgtggagactgtccagtggtatcctcacgacactggcatgttcacg
tcaagctcatttgataaaactctgaaagtatgggatacaaatacattacaagctgcagat
gtatttaattttgaagaaacagtttatagtcatcatatgtctccagtcgccaccaagcac
tgtttggtagcagttggtactagagggcccaagntacaactttgtgacttaaagtctgga
tcctgttcccacattctacagggtcacagacaagaaatattggcagtttcctggtcaccg
cgttctgaatatgtcttggcaactgcaagtgctgacagtagagtaaaattatgggatgtg
aggagagcatcgggatgtttgattactcttgatcagcataatgggacaaaatcacaagct
gttgaatcagctaatactgctcacaatgggaaagttaatggcttgtgttttacaagtgat
gggcttcacctcctcaccattggtacagataatcggatgaggctctggaatagttccagt
ggagaaaacacactagtgaattatggaaaagttnttaatgacagtagaaaaggattgaaa
ttcactgtctcctgtggctgcagttcagaatttgtttttgtaccatatggtagcaccatt
gctgtttatacaatttactcaggagaacagataactatgcttaagggacattataaaagt
gttgactgctgcatatttcagtctaatttccaggaactttatagtggtagcagagactgc
aatatccttgcttgggtaccagcattatatgaaccagttcctgatgatgatgagactaca
accaaatcacagttaaatgcagcctttcaagatgcctggagcagcagtgatgaagaagga
tga

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