Rhinolophus ferrumequinum (greater horseshoe bat): 117025453
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Entry
117025453 CDS
T07722
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rfq04990
]
117025453 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
rfq04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117025453 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
EGF_Teneurin
CzcE
Motif
Other DBs
NCBI-GeneID:
117025453
NCBI-ProteinID:
XP_032967212
Ensembl:
ENSRFEG00010001292
LinkDB
All DBs
Position
8:complement(559867..630856)
Genome browser
AA seq
1437 aa
AA seq
DB search
MQPGAAWALLLAAALGLGARGVRGAVALGDFYPFGAERGDAVTLKQDDGGSGLQPLSVPF
PFFGTEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
TTDPATLHRATEDIRRYFPELPDFTATWVFIATWYRVTFFGGSSSSPVNTFQTVLVTDGK
FSFTIFNYESITWTTGTHASSGGDATGLGGIAAQAGFNAGDGRRYFSIPGSRTADMAEVE
TTTNVGAPGRWAFRIDDAQVRVGGCAHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLYVNECASHPCQNGGACTHGVNSFSCQCPDGFGGPTCETALSPCDTKECAN
GGQCQAESGSAVCVCQAGYTGIACETDLNECGSDPCLNGGSCVDLVGNFTCLCAEPFEGP
RCETGSHPVPDACLSAPCQNGGTCVDADQGYVCECPEGFMGLDCRERTPKDDCECHNGGR
CLGANTTLCQCPPGFFGFLCEFEVTATPCNVNTQCPDGGYCMEYGGSYLCVCHTHHNVSH
PLPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCKEAG
GEYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPS
PCFRSPCVNGGTCKDLGTDFSCHCQAGYTGRRCQAEVDCGPPEEVKHATLRFNGTRWGSV
ALYLCDRGYSLSVPNSVRVCQPHGVWSEPPQCHEIDECRSQPCLHGGSCQDQVAGYQCIC
SPGHEGAHCELETDECQAQPCRNGGSCRNLPGAFVCQCPAGYAGVHCETEVDACHSSPCQ
HGGRCENGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTG
KDCAKELFPPTALKVERVEESGVSISWRPPEGQAARQVLDGYAVTYASSDGSARRTDFVE
RSRSSHQLRALAAGRAYNISVFSVKRNANNQNDISRPVALLARTRPRPIEGLEVVNVTAT
AISVRWALHRVRHATVSSVRVSIRHPEAQGDQSTDVDRSVDKFVFGALLPGRRYTIWVTA
LSGLGGQGRPTESLASAPQHVWTRPLPPANLTATRVTATSAHVVWDAPTPGTLLEAYVIN
VTTSQSTKSRYVPNGRLVSYTVRDLVPGRRYQLSVTAVQSTAGDQLHSEPAHLYIITSPR
DGADRRWHREGLHPRVLRNRPPPARLPELRLLNDRGAPETPTQAPSRFSELVDGRGRTSA
KFGGSPSKSVTVTSQPTAVLPREHTGDAPEQVGLALQLPERGGGDKAVESRPQAQTGLPH
HPDPREGRALDEGGAECPACHLQGHGSLKAPRVPRTPVHSRAPARGCTCQRQPRSPSASE
RAGLRSETAGGRFCHGAGRDTHRCCFISEIKSSEGLRYVSPFQCSMFRFIKLTNGLS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccggcgccgcctgggctctgctcttggccgcggccctgggactcggggcgcgc
ggagtgcgaggcgcggtggccctgggcgacttctacccgttcggcgcggagcgcggcgac
gccgtcactctcaagcaagacgacggcggctcggggctgcagccactctccgtgcccttc
ccgttcttcggcaccgagcactccggactctacgtgaacaacaacgggatcatctccttc
ctgaaggaggtttctcagttcaccccggtggccttccccattgccaaggaccgctgcgtg
gtggcggccttctgggcagacgtggacaaccggcgcgcaggggacgtgtactacagggag
accaccgaccccgccacgctgcacagagccacagaggacatcagacgttactttcccgag
ctcccagacttcaccgccacctgggttttcatcgccacctggtaccgtgtgaccttcttt
ggaggcagctcctcctcccccgtcaacacgttccagaccgtgcttgtcactgatggcaag
ttttctttcaccatcttcaactacgagtccatcacgtggaccactggcacacatgccagc
agcgggggcgacgccactggcctggggggcatcgcggcccaggctggcttcaacgccggg
gatgggcggcgctacttcagcatccccggctcacgcacagcggacatggcagaggtggag
accaccaccaacgtgggagcgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcgcccatacaacctccgtgtgcctggccctgcgcccgtgcctcaat
ggtggcaagtgcatcgacgactgcgtcacaggcaacccctcctacacctgctcctgcctc
tcaggcttcacggggaggaggtgccacctgtatgtgaacgagtgtgcatctcacccgtgt
cagaacggcggggcctgcacacatggcgtcaacagcttcagctgccagtgcccggacggc
ttcgggggacccacctgtgagacagcactatctccatgtgacaccaaagagtgtgcgaat
ggcggccagtgccaggcagaaagcggctccgcggtgtgcgtgtgccaggccggctacacc
ggcatcgcttgcgagacggacttgaacgaatgcggctccgacccatgtcttaacggaggc
tcgtgtgtggacctcgtggggaacttcacctgcctgtgcgcagagcccttcgagggaccg
cgctgcgagacaggaagccacccagtgcccgacgcctgtctgtcggccccttgccagaac
gggggaacctgtgtggacgcagatcagggctacgtgtgcgagtgcccagaaggcttcatg
ggcctggactgcagggagagaacccccaaggacgactgtgagtgtcacaacggtggcaga
tgcctgggagccaacaccaccctctgccagtgccccccgggcttctttgggttcctctgc
gaattcgaagtcacggccacgccctgcaacgtgaacacgcagtgccccgacgggggctac
tgcatggagtacggcgggagctacctgtgcgtctgccacacccaccacaacgtcagtcac
ccactgccgtcaccctgcgactccgacccctgcttcaacggaggctcctgtgatgcccac
gacgactcctacacgtgcgagtgtccccgcgggttccatggcaggcactgcgagaaagcc
cggccacgcctgtgcagctcggggccctgccggaatggaggcacgtgcaaggaggcgggc
ggcgagtaccactgcagctgcccttaccgcttcaccgggaggcactgtgagatcgggaag
ccagattcgtgtgcctcgggcccctgtcacaacggaggcacctgctttcactacatcggc
aaatacaagtgtgactgtcccccaggcttctctgggaggcactgtgagatagccccctcc
ccctgcttccggagcccctgtgtgaatgggggtacctgcaaggacctgggcacagatttc
tcctgccactgccaagcagggtacacgggacgccggtgccaggcggaggtagactgcggc
ccccccgaggaggtgaagcatgccacgctgcgcttcaatggcactcggtggggctcggtg
gccctgtacttgtgtgaccgaggctacagcctgagtgtccccaactccgtccgggtctgc
cagccacatggtgtctggagcgagcctccccagtgccacgaaattgatgagtgccgatcc
cagccgtgcctgcatgggggctcctgccaggaccaagtcgccggctaccagtgcatctgc
agcccagggcatgaaggagcccactgtgagctggagacagacgagtgccaggcacagccc
tgcagaaatggaggctcttgcaggaacctcccaggggcctttgtctgccagtgtcccgca
ggatatgctggagtccactgcgagacagaggtggacgcctgccactccagcccctgccag
catggaggccggtgcgagaacggcggcggggcctacctgtgcgtctgcccagagggcttc
ttcggctaccactgtgagacagtgagtgacccctgcttctctagcccctgtgggggccgc
ggttactgcctggccagcaatgggtcccacagctgcacctgcaaagtgggctacactggc
aaggactgcgccaaagagctcttcccaccaacggccctcaaggtggagcgagtggaggag
agcggggtgtccatctcctggcgcccacccgaaggccaggctgccaggcaggtgctggac
ggctacgcggtcacctacgcgtcctcggacggctcggcccgccgcacggacttcgtcgag
cgcagccgctcctcgcaccagctccgggccctggcggctggaagggcctacaacatctct
gtcttctctgtcaagcgtaatgccaacaaccagaatgacatcagcaggccggtggcactg
ctcgcccgcacgcgaccccgccctatcgagggcctggaggtcgtcaacgtgacggccacc
gccatctccgtgcggtgggctctgcaccgggtccgtcatgccactgtcagcagtgtccgc
gtgtccatccgccaccccgaggcccagggggaccagtccaccgacgtggataggagtgtg
gacaagttcgtgttcggggcactgctgccaggaaggaggtacaccatctgggtgaccgcc
ctcagtgggctcgggggacagggacgccccaccgagagcctggcctcggcgccgcaacac
gtgtggacccggcctctgccgccagcaaacctgaccgccacccgcgtcacggccacctcc
gcccacgtggtctgggatgcccccactccaggcaccttgctggaagcatatgtcatcaac
gtgaccaccagccagagcaccaagagtcgctacgtccccaacgggaggctggtgtcctac
acggtgcgggacctggtgcccgggcggcggtaccagctctcggtgacggccgtacagagc
accgcaggcgaccagctgcacagcgagcccgctcacctgtacatcatcacctccccaaga
gacggtgcagacagacgctggcaccgggaaggactccacccacgggtgctcagaaacaga
ccgcccccagcacgcctgccggagctgcgtctgctcaacgaccgcggggcccccgaaacg
ccaacccaggcccccagcaggttctcggagcttgtggatggcagaggacgaacgagtgcc
aagtttggtggctcacccagcaaatcggtcactgtgacatcacaacccacggctgtgctg
ccacgcgagcacacaggagatgcccccgagcaggtcggcctggccctccagctccccgaa
cgcggcggcggtgacaaggctgtggaaagtcggccacaggctcagactgggctcccccat
cacccggatcccagagaaggcagagcacttgatgaagggggagccgagtgcccagcatgc
catctccaagggcacggctccctgaaggcccccagggtccccaggacacctgtacactcc
agggcacctgccagagggtgcacgtgccaacggcaaccccgcagcccgtcggcctccgag
agggccggtttgcggtcagagacagcaggcggacgattctgtcatggtgctgggcgagac
actcatcgctgctgttttataagtgaaataaagtcatcagagggcttgcgttatgtcagc
ccttttcagtgttcaatgtttcgtttcataaaactgaccaatggcctctcctga
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integrated database retrieval system
