Rhinolophus ferrumequinum (greater horseshoe bat): 117025810
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Entry
117025810 CDS
T07722
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04151
PI3K-Akt signaling pathway
rfq04382
Cornified envelope formation
rfq04510
Focal adhesion
rfq04512
ECM-receptor interaction
rfq04518
Integrin signaling
rfq04820
Cytoskeleton in muscle cells
rfq04926
Relaxin signaling pathway
rfq04933
AGE-RAGE signaling pathway in diabetic complications
rfq04974
Protein digestion and absorption
rfq05146
Amoebiasis
rfq05165
Human papillomavirus infection
rfq05200
Pathways in cancer
rfq05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117025810 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117025810 (COL4A4)
04518 Integrin signaling
117025810 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117025810 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117025810 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
117025810 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
117025810 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
117025810 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117025810 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
117025810 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117025810 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
117025810 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117025810 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfq04147
]
117025810 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
rfq00536
]
117025810 (COL4A4)
Exosome [BR:
rfq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117025810 (COL4A4)
Glycosaminoglycan binding proteins [BR:
rfq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117025810 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117025810
NCBI-ProteinID:
XP_032967925
Ensembl:
ENSRFEG00010017759
LinkDB
All DBs
Position
8:10054968..10173197
Genome browser
AA seq
1688 aa
AA seq
DB search
MCVELVRCSFRWNKPLATDPWSLIFIVFSVQHVYGSGKKFIGPCGGRDCSVCQCFPEKGS
RGQPGAPGPQGPIGPLGPPGPFGIPGEKGMSGDSGLPGAAGDVGDKGPTGVPGFPGLDGI
PGHPGPPGPRGKPGMNGYNGSRGDPGFPGERGAPGPRGPPGRPGESGEKGNSVFIVGGIK
GIQGDRGDPGPPGLPGPRGLRGPAGRAGYPGEQGLTGPPGQPGSPGLKGNPGVGVKGQMG
DPGEVGPQGSPGPTLLIQPPDFSLYKGEKGVKGMPGMAGPPGPPGPKGEPGIGEKGEKGI
PGFAGPRGDPGSYGSPGFPGLKGETGLFGDPGPFGFLGPKGDPGDRGHPGPPGVLATPPF
PLKGPQGDPGLPGRYGEMGDAGHPGPPGPPGRPGETCPGMMGHPGPPGLPGHPGLPGEAG
IPGRPDSAPGKPGNPGPPGLPGPPGLQGPPGSDVIYCSVGHPGPPGVKGKMGPPGRRGSK
GEKGNAGLCACKPGPMGSPGPPGLPGRPGSKGDMGLPGWPGEKGHPGPPGAEGSPGPPGK
PGAPGPPGNKGEKGDRVVSRVKGRKGERGPDGPPGFPGQHGQDGWDGHAGAKGDPGPPGD
HEDATPGDQGFPGPPGPPGREGPRGPPGLGLPGPPGKRGPPGSPGCPGERGPDGMKGQKG
DIISCNVSYPGRPGPPGFDGPPGPKGFPGPPGPPGQRCFDGQKGQPGKPGKSGIPGPPGF
HGDMGDPGFEGEKGSSPVGPPGPPGSPGRNGQKGLPGDHAYGHPGPPGKRGPPGVPGLKG
PRGDPGYPGATGPAGMPGLPGLKGPKGREGRAGFPGLPGPPGHSCERGAPGLPGQPGLPG
SPGSPGAPGQKGQRGDMGPAGPVGMKGLPGVPGQPGAEGPRGPPGIPGPFGDDGLPGLPG
PKGPQGQPGLPGFPGERGKPGPDGPPGRKGEAGEKGWPGFWGDQGVKGAKGERGPKGDAG
EMALISKKGKTGDPGPPGDYGLPGEEGDKGNPGTPGRRGEPGRHGPPGFHRGEPGGKGQP
GLPGPPGPPGLPGLRGIIGFPGFPGDQGEPGSPGPPGFSGIDGTRGPKGIKGDPASQISP
PGPKGEPGSPGCPGHVGTPGDKGFPGIQGPKGPPGRPGLPGSSGPPGCPGNQGMPGPMGH
PGEKGDPGPRGLMGDPGTPGLPGIKGLPGLPGLDGLHGLKGQKGTKGASGLTTKGPPGPM
GIPGRKGEIGDPGSPGISPPGLFGEKGPPGPPGRPGPPGPPGARGRAPKGVIPEPGPPGD
QGPPGPDGPRGAPGPPGPPGSVDLLRGEPGDDGLPGPPGPKGPPGPPGQKGFPGCDGQHG
QKGPMGFPGPQGPHGLPGSPGEKGLPGPPGRQGPPGPPGSRGEQGPPADLDDCPRIPGLP
GVPGPRGPEGAVGLPGKRGPPGPGCKGERGMDGTKGENGIPGAPGPPGQKGDMGEAGCPG
APGPPGPIGDPGPKGFGPAYLSGFLLVLHSQTDGEPTCPVGMPRLWTGYSLLYLEGQERA
HNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPMVPLSEEEIRPY
ISRCAVCEAPAQAVAVHSQDQSIPPCPHAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSC
LEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVQPHLQFSSAPSPDTFKENQAQRQKISR
CQVCVKST
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggagttagtaagatgctctttcaggtggaacaaacccttggccacagatccc
tggtcacttatatttattgtcttttctgtacaacacgtatatgggagtggaaagaaattc
attggtccttgtggaggaagagactgctctgtttgccagtgctttcctgaaaaggggtct
cggggtcaacccggagcacctggaccacagggtcctattggacccctaggacctcccgga
ccctttgggattccaggagagaaagggatgagcggtgacagtggccttcctggagcagca
ggtgatgtgggagataagggtccaactggtgttcctggatttccaggtttggatggcata
cctggacacccagggccccctggacccagaggcaaacctggcatgaatggctacaatggc
tcaagaggtgatccagggtttccaggagaaagaggagctcctggccctagaggtccccca
ggccggcctggggaaagtggagaaaaaggaaactcagtgttcattgtaggtggcattaaa
ggtattcagggtgacagaggggacccaggacctccaggcttaccaggacccaggggtttg
agaggcccggcaggtcgagcgggatatccaggagagcagggcttaacaggacctccgggc
cagcctgggagtccaggtttgaagggtaatcctggtgtaggagtaaaggggcaaatggga
gacccgggtgaggttggcccgcaaggttctcctggacccaccctactgatacagccccct
gatttttctctctataaaggagaaaagggtgtaaaaggaatgcctggaatggctggacct
ccaggaccaccaggacccaagggggagcctggaattggggaaaaaggagaaaagggcatt
cctgggttcgcgggccctcggggtgacccaggctcctatggatctccaggttttccagga
ttaaagggggaaacaggactatttggagatcctgggccatttggatttcttggcccaaag
ggggatcctggagaccgcgggcacccaggaccaccaggtgttttggcaactccacctttt
ccgcttaaaggtcctcagggggatcctgggctcccaggacgctatggagagatgggggat
gctggacaccctggtccccccggccccccaggtagaccaggggaaacctgtccaggcatg
atgggacacccagggccaccagggcttcctggtcatcctggacttccaggggaagctggt
atacctggaagacctgattctgctccaggaaaaccagggaatccgggaccacctgggttg
cctggaccaccagggctgcagggacctccaggatcagatgttatatattgcagtgttggg
catcctggaccaccaggagtaaaaggcaaaatgggtcctccaggaagaagaggctcaaaa
ggagaaaaaggaaatgcagggctctgtgcctgcaagcctggtcccatgggttcaccaggc
cctccaggacttcctgggaggccaggtagtaagggagacatggggctccctgggtggcct
ggagaaaaaggtcacccaggccctcctggtgctgaaggatctccagggccaccgggaaaa
cctggtgccccaggaccacctggcaacaaaggagaaaagggcgacagggttgtctcaaga
gttaaagggcgcaaaggagaaagaggacctgatggccccccaggatttccagggcagcat
ggacaagatggttgggacggacatgctggagcaaaaggggatccaggacccccaggggat
catgaagatgccaccccaggtgatcaaggatttcctggaccgccaggcccccctggcaga
gaagggcctaggggccctccaggactgggacttcctggtccaccgggaaaaagggggcct
ccaggatctccgggctgcccaggcgagaggggccctgatggcatgaagggtcagaaaggt
gatatcatttcttgtaatgtctcctacccagggaggccaggccctccaggttttgatgga
cctccaggtccaaagggatttccaggcccaccgggtcctccagggcagaggtgttttgat
gggcaaaaaggtcagcctggcaaaccaggaaaatcaggaatacctggtccacctggtttt
catggtgacatgggagatccaggttttgaaggtgaaaaggggtcctctcctgtcgggccc
ccaggccctcctggttcacctggaagaaatggccagaaaggactacccggagatcatgct
tatggccacccaggacccccaggaaagaggggtcctccaggagtgccagggttgaaagga
ccaagaggtgacccaggatatccaggggctacagggccagctggcatgcctggattgcca
ggtctgaaaggtcccaaaggcagagagggacgtgcagggtttccaggcctcccaggtcca
cctggccattcctgcgaaagaggtgctcccgggttaccaggacaaccgggactccctggg
tctccaggaagtccaggtgccccaggtcagaagggacagagaggggatatgggacctgct
ggaccggttggaatgaagggtctcccaggagtgccaggacagcctggggcagaaggaccc
cgaggccccccgggaatcccaggaccctttggcgacgatggactacctggtctcccaggc
ccaaagggaccccaggggcagcctggcctcccaggttttccaggagagagaggaaagcct
ggcccagacggaccccctggcaggaagggagaagccggagagaagggttggcctggcttc
tggggcgaccagggagtgaaaggtgccaaaggagagagaggacccaaaggagatgcggga
gaaatggctctaatttccaaaaaggggaaaaccggggaccctggacctcctggagattat
ggactcccaggagaagaaggtgataaaggcaatcctgggacaccggggaggagaggagag
ccgggaagacacggaccacctggatttcacagaggagagcctggtggaaaagggcagcca
gggcttccgggacccccaggccctccaggcttgccggggctgagagggatcattggtttc
ccgggatttccaggtgaccagggtgagccgggttctccagggccccctggattttcagga
attgatggaacgagaggacctaaaggaatcaaaggtgaccctgcaagtcagatcagccca
cctggtccaaagggtgagccaggtagtcctggatgtccagggcatgttggaaccccggga
gacaagggcttccctggcattcaaggacccaaaggaccaccaggaaggcctggactgcct
ggctcctctggaccaccaggatgtccaggtaatcaagggatgcctgggccaatgggacat
ccaggagaaaagggggatcctggacccagaggcctcatgggggatccagggacacctggt
cttccaggaataaaaggtctccccggattacccggcctggacggcctgcatggtttaaag
ggtcagaaaggaaccaaaggtgcttcaggtttgactaccaagggcccacctggtccaatg
ggaatacctgggaggaaaggggagataggagaccctgggagcccaggaatttctcctcca
ggcctttttggagaaaaaggtcctccaggtccaccagggagacctggaccacctggtcct
ccaggagccagaggaagagctcctaagggtgtcattcctgagccgggtccgcctggagat
caagggcctcctggccctgatggcccaagaggagcacccgggcctccaggtccccctggg
agtgttgacctcctgcgaggggagccaggtgacgatggtctgccggggcctcctggtccc
aagggcccaccaggccctccaggacagaaaggcttcccaggatgtgatgggcagcatgga
cagaaaggaccaatgggattcccggggccacaggggccacatggacttcctgggtcacct
ggagagaagggtttacctggccctccaggcagacaagggccccctggtcctccaggttcc
agaggtgaacaggggccacctgcagatttggacgactgcccccgaatccctgggcttcct
ggagtaccaggcccacgaggcccagaaggagccgtagggctccccggaaagagaggcccc
ccaggaccagggtgcaaaggagagcgtggcatggatggcacgaagggtgagaatggcatc
ccaggggcccctggacctccgggacagaaaggtgacatgggagaagccggctgccctgga
gcaccaggccctcctgggcccattggggatccggggcccaaagggtttggccctgcgtac
ctcagcggcttcctgctggttctccacagtcagacagatggagagcccacctgccccgtg
ggcatgcccaggctctggacgggctacagtctcttatacctggaaggacaggagagagct
cacaaccaagacctcggtctggcggggtcttgcctccccgtgtttagcacgctgcccttt
gcctactgtaatatccaccaagtgtgccactacgcccggagaaacgacaggtcctactgg
ctggccagcgccgcgcccctgcccatggtgcccctctcagaggaggagatccgcccgtac
atcagccgctgcgccgtgtgtgaggccccggcccaggcggtggccgtgcacagccaggac
cagtccatcccgccgtgtccgcacgcctggcgcagcctctggattgggtactccttcctg
atgcacactggagccggggaccaaggaggagggcaggccctcatgtcacctggcagctgc
ctggaagatttcagagcggccccattccttgaatgccaaggccggcaaggtacttgtcac
ttttttgcaaataagtatagcttctggctgacaacggtgcaaccacacctgcagttttcc
tcggcaccatcaccagacaccttcaaagaaaaccaggcccagcgacagaaaatcagcagg
tgccaggtctgcgtgaagagtacttag
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