Rhinolophus ferrumequinum (greater horseshoe bat): 117025936
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Entry
117025936 CDS
T07722
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117025936 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117025936 (TRIP12)
Enzymes [BR:
rfq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117025936 (TRIP12)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
HECT type E3
117025936 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
117025936
NCBI-ProteinID:
XP_032968186
Ensembl:
ENSRFEG00010015254
LinkDB
All DBs
Position
8:8086541..8229255
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASPD
YNRTNSPSSAKKPKALQHTESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKSG
ATGGSSRSQKRKRTESSCIKSGSVSESTGAEERSAKPTKLASKSATSAKAGCSAITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADAESNQETVNSSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQDQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTPVSSGTATAATNAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEVIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGNQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLRYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSNIDIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactactgaactgtcaaggggacacctttctaaaagaagctgcagttcatcatct
gctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaaggcagaaa
acggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtccagac
tacaacaggaccaattctcctagctctgcaaaaaaacccaaagcacttcagcatactgaa
tctccctcagaaacaaataaaccacatagtaagtcaaagaagagacatttagaccaggag
caacaactgaaatctgcacaatcgccatcaacaagcaaggctcataccagaaagagtggg
gccactggtggtagttcacggagtcagaaaagaaagaggacagagagttcttgtataaag
agtggttctgtgtctgaatcaacgggtgctgaagagagatctgcaaaacctaccaagctg
gcttcaaaatcagccacctcggccaaagctgggtgtagcgccatcaccgactcttcttct
gctgcctctacttcctcctcgtcttctgctgtagcctcggcctcctccactgttccacca
ggtgccagggtgaaacaagggaaagaccagaacaaagccaggcgttcccgttcagcctcc
agccccagccccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgcgcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaaggaaatctaccaagaagcgcagtgaatccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtgccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaagagaaaatggcagac
gctgagagcaaccaggagaccgtgaattcttcagctgcacggacagacgagactccccag
ggtgctgcagcctctagttctgttgcaggggctgtgggcatgaccacctctggggagagt
gaatcagatgattccgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggccctcttggtcctcggatgtcacagctattccacagaacaattgga
agtggagctagttctaaggcccagcagcttctgcaaggactgcaagcaagtgatgaaagt
cagcaactccaagcagttattgaaatgtgtcagctattggtcatgggaaatgaggagaca
ctgggagggtttcctgttaagagtgtcgttccagctttgataacattactgcagatggag
cataatttcgatattatgaaccatgcttgtagagccttaacatacatgatggaagcactt
cctcgatcatctgctgttgtagtagatgcaattcctgtctttttagaaaagctgcaagtt
attcagtgtattgatgtggcggagcaggctctgaccgccctggagatgttatcacgtaga
cacagtaaagccatcctacaggcgggtggtttggcagactgcttgctctatctcgaattc
ttcagcataaatgcccaaagaaacgcactagcaattgcagccaattgctgccagagcatc
acgccagatgaatttcattttgtggcagattccctcccattgcttacccaaaggctaacc
caccaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtctagtggacaac
ttccagcacgaggagaatttactccagcaggttgcctccaaagatctgcttacaaatgtt
caacagctgttggtagtgactccaccaattttaagttctgggatgtttataatggtggta
cgcatgttttctctgatgtgttccaactgtccaactttagccgttcaacttatgaagcaa
aacattgcagaaacgcttcacttcctcctttgtggtgcctccaatggaagttgtcaggat
cagatagaccttgttccacgcagtcctcaagaactctatgaactgacgtctctgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgccgttgataccatgctgaagaag
ggaaatgcgcagaacacagatggtgcgatatggcagtggcgggacgaccggggcctctgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagaattaaagaaggatgatgctcgagcacagcttatg
aaagaggatccggaactggctaagtcttttattaagacattatttggtgttctttatgaa
gtgtatagttcctcagcaggacctgcggtcagacataagtgccttagagcaattcttagg
atcatttattttgctgatgccgaacttctgaaggacgtcctgaaaaatcatgccgtttca
agtcacattgcttccatgctatcaagccaagacctgaagatagtagttggagcacttcag
atggcagaaatcttaatgcagaagttacctgatatttttagtgtttacttcagaagagaa
ggtgtaatgcatcaagtaaaacacttggcggaatcggagtctttgctgacaagcccacca
aaggcgtgcacgaatgggtcaggatccttagggtccacgacaccagtcagcagtggaaca
gccacggctgccacgaacgccgcggccgacttggggtcccccagcttgcagcacagcaga
gacgattctttagatctgagccctcaaggtcgattaagtgatgttctaaagagaaaacga
ctgccaaaacgagggccaagaaggccaaagtattcacctccaagagatgacgacaaagta
gacaatcaagctaaaagtcccaccactactcagtcacctaaatcttctttcctggcaagc
ttgaatccaaaaacgtggggaaggttaagtgcacagtccaacagcaacaacatcgaaccg
gcacgaactgcgggagttagtggtcttgccagggctgcctcaaaggacaccatctccaat
aatagagaaaaaattaaaggttggattaaggagcaggcacataaatttgtcgagcgttac
ttcagttctgagaacatggatgggagcaaccctgcactgaacgtcctgcagagactttgt
gctgcaaccgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtttcatcttttgaaatccaacatagtggatttgtg
aagcagctgttgctttatttgacatctaaaagtgaaaaggatgccgtgagcagagagatc
agattaaagagatttcttcatgtatttttttcttctccacttcctggagaagagcccatt
ggaagagtagaaccagtgggtaatgcacctttgttggcattagttcacaagatgaacaac
tgcctcagccagatggaacaatttccagtcaaagtgcacgacttccccagtggaaatggg
acaggaggcagcttttctcttaacagaggatcacaggctttaaaatttttcaacacacat
cagttaaaatgccaattacaaagacatccagactgtgcaaatgtgaagcagtggaagggt
ggacctgtcaagattgaccccctggctttggtacaagctatcgaacgataccttgtagtt
agagggtatggaagagtgagagaagatgatgaagacagcgatgatgatggctccgatgag
gaaatagatgaatctctggctgctcagttcttaaattcaggaaatgtaagacacaggcta
caattttacattggagaacatttgctcccatataacatgactgtgtatcaggcagtacgg
cagttcagtatacaggctgaagatgaaagggaatccacggatgatgagagcaatcctcta
ggaagagctggtatttggacaaagactcatacaatatggtacaaaccggtgagagaggat
gaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccaaacagctccaaca
aaaacttctcctagaaatgcaaaaaagcatgatgagttatggcacgatggagtgtgccca
tcagtatcaaatcctttagaagtttacctcatacccacaccacctgaaaatataactttt
gaagacccgtcgttagatgtgattcttcttttaagagttttacatgccatcagtcgatac
tggtattacttgtatgataatgcaatgtgcaaggaggttattccaactagtgaatttatt
aacagtaagttgacagcaaaagcaaataggcagcttcaagaccctttagtgatcatgaca
ggaaacatcccgacgtggcttactgaactaggaaaaacctgcccatttttcttccctttt
gatacccggcaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagatagcagagttgcacct
agattggatagaaaaaaacgaactgtgaacagagaggagctgctaaaacaagctgagtct
gtgatgcaggatctgggcagctcacgggccatgttagaaatccagtatgaaaatgaggtt
ggtacaggtcttgggcctacactggagttttatgcacttgtatctcaggaactgcagaga
gctgacttgggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaaaccaa
gaagggaccaagtatattcaaaacctccagggcctgttcgcgcttccttttggtaggaca
gctaagccagctcatatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatg
gccaaggctatcatggatttccgattggtggaccttccccttggcttacctttttataaa
tggatgctacggcaagaaacgtcactgacatcgcacgatttgtttgacattgacccagtt
gtagccagatcagtgtatcacctagaagacattgtcagacagaagaaaagacttgaacaa
gataaatcccagaccaaagagagtctacgatatgcattagaaaccctgactatgaatggc
tgttcagttgaagatctaggattggattttactctgccagggtttcccaacatcgaactg
aagaaaggaggaaaggatataccagtcacaatccacaatctcgaggagtatttgagactg
gttatattctgggcactaaatgaaggcgtttccaggcaatttgattcattcagagatgga
tttgaatccgtcttcccactcagtcatcttcagtacttctacccagaagaactggaccag
ctcttgtgtggcagtaaggcagacacttgggatgcaaagacactgatggaatgctgcagg
ccagatcacggttacactcacgacagtcgggctgtgaagtttttgtttgagattctcagt
agttttgataatgagcagcagaggttatttctgcagtttgtgacaggtagcccaagattg
cctgttggaggcttccggagtttgaatccacctttgacaattgtccggaagacatttgag
tcaacagaaaacccggatgactttctgccctccgtaatgacttgtgtgaactatctgaag
ttgccggactattcaaacattgatataatgcgggaaaaactgttgatagcagcaagagaa
gggcagcagtcgttccatctttcctga
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integrated database retrieval system
