Rhinolophus ferrumequinum (greater horseshoe bat): 117026148
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Entry
117026148 CDS
T07722
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117026148 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfq03041
]
117026148 (SF3B1)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117026148 (SF3B1)
Spliceosome [BR:
rfq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
117026148 (SF3B1)
Complex B
117026148 (SF3B1)
Complex C
U2 SnRNP specific factors
117026148 (SF3B1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117026148 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
117026148
NCBI-ProteinID:
XP_032968568
Ensembl:
ENSRFEG00010022087
UniProt:
A0A671GD48
LinkDB
All DBs
Position
8:33144658..33204209
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRSK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatatcgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgat
caggaaatttacggtggaagtgacagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgctcggtcagaag
aagccaggataccatgcccctgtggcattgcttaatgatataccacagtcaacggaacag
tatgatccatttgctgagcaccgacctccgaaaattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctagaacttacatggatgtaatgcgagaacagcat
ttgactaaagaggagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagctgatcagactcctggtgccactcccaagaagctatcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgttcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagtcac
acaccagcgggagctgctactcctggacgaggcgatacaccaggccatgcaacaccaggc
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgagaccccgaaaacagaa
agagatactcctggacatggaagtggatgggctgagactcctagaacagatcgaggtgga
gattcaattggtgaaacacctactcctggagccagtaaaagaaagtcacgatgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacacctggaaaaacacctatt
ggcacaccagcaatgaacatggctacccccactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagagaaattgatgaaagaaatcgcccactttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgactgcgactccgacccctctgggcggc
atgactggcttccatatgcagactgaagataggactatgaagagtgttaacgaccagcca
tcagggaaccttccgttcttaaaacctgatgatattcagtacttcgataaacttctggtg
gacgtggatgaatccacactgagccctgaagagcagaaggagaggaagatcatgaagcta
cttttgaaaattaagaatggaacgccccccatgagaaaggctgccttgcgtcagattact
gataaagctcgtgagtttggagctggtcctttgtttaatcagattcttcctcttctgatg
tctcctacacttgaggatcaagagcgtcatttacttgtcaaagttattgatagaatattg
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtcattgaacca
ttactgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gacgagtatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattattgcctttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacatactggtattaagatcgtacagcagatagctattcttatgggctgtgccatattg
ccacatctgagaagtttagttgaaatcattgaacacggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttacggt
attgaatcttttgattctgtgttaaagcctctatggaagggtatccgccaacacagagga
aagggtctggctgccttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgctgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcccttttttaaacacttctggcaa
caccgaatggctttggatagaagaaattaccgacagttagttgatactactgtggagtta
gcaaacaaagtaggtgccgcagaaattatatccaggattgtggatgatctgaaagacgaa
gctgaacagtacagaaaaatggtgatggaaacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaatgggtttggcacagtggtcaatgca
cttggcaaacgggtcaagccttacttgcctcagatatgtggtacagttttgtggcgtttg
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatctctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttgtatgaa
tatttgggtgaagaataccctgaagtattgggcagcattcttggagcgctgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
acccccatcttaaagaacagacatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtcagcaagagagtggatgaggatttgcttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggctattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccaccgtagcaatagctattgtcgcc
gaaacgtgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaacgttcaaaatggagtgttaaaatcactttccttcctgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggatagg
gaccttgtacacagacagaccgctagtgcggtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagttatgggagccctggagggcttgcgagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gattatatcttataa
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integrated database retrieval system
