Rhinolophus ferrumequinum (greater horseshoe bat): 117026183
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Entry
117026183 CDS
T07722
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04613
Neutrophil extracellular trap formation
rfq05014
Amyotrophic lateral sclerosis
rfq05034
Alcoholism
rfq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117026183 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117026183 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117026183 (HDAC6)
09165 Substance dependence
05034 Alcoholism
117026183 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rfq01009
]
117026183 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117026183 (HDAC6)
04131 Membrane trafficking [BR:
rfq04131
]
117026183 (HDAC6)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117026183 (HDAC6)
Enzymes [BR:
rfq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117026183 (HDAC6)
Protein phosphatases and associated proteins [BR:
rfq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117026183 (HDAC6)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117026183 (HDAC6)
Membrane trafficking [BR:
rfq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117026183 (HDAC6)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117026183 (HDAC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117026183
NCBI-ProteinID:
XP_032968637
Ensembl:
ENSRFEG00010000672
UniProt:
A0A671DJS9
LinkDB
All DBs
Position
X:complement(85797115..85816078)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGAKKGAVLRSSPKLAEVKKKGRMKKLS
QETGQDLIVGLQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLQILLPVTLEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLESPGAPCPSA
QLSLSCTLEALEPFWEVLVRSDDTLEEDSVEGNNAEEEEEEERPWQPPVLPVLTWPVLQA
RTGLVYDQRMMGHYNLWDNHHPEMPQRVSQIMCRLEELGLAERCLILPTRPATDAELLTC
HSAEYVGRLRATEKMKTRELHREGASFDSIYICPSTFACAKLATGATCCLVEAVLAGEVL
NGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI
FEEDPSILYVSLHRYDHGTFFPMGDEGASNQVGWAAGMGFTVNVAWNGPRMGDAEYLAAW
HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQLSPEGYAHLTHLLMGLASGRIILILE
GGYNLTSISESMAACTRTLLGDPPPVLTLPRPPLSGALASIAETIQVHRRYWRSLRVMKV
KDKEGPSSSKLITKEAPQPANPGSAEGLTTLEGNILDTSMGKTTLASSVQESTPPQTKSE
AAVAELTQDQSSEAAVPDPTTSEGAVSDPTTSEGAVPDPTTSEGAVPDPTTSEGAVPDPT
TSEEAVGGAELIQTCPALCTDNQTPPASPVQGATPQSSPTKLTGILRILELDNKAQGSPQ
PQIPEEERLLGEAAGGQDVDDSVLMQVFGDTDQAMFYAVTPLPWCPHLVAVCPIPEAGLD
VTQPCQDCGEFQENWVCLSCYEVYCSRYVNAHMLQHHEASGHPLVLSYVDLSTWCYQCQA
YVHHQAVLDVKNVAHQNKFGEDMPHSH
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattccaccacaaccaggcagcgaaggagtaggcacaacccc
cactcgcccccccacgactccagcgtcacctcgaagcgaggtgctaagaagggtgccgta
ctccgctccagccccaaactagcggaggttaagaagaaaggcagaatgaagaagctcagc
caagaaacagggcaagacctaatcgtgggcctgcaagggctggatctgaaccttgaggcc
aagacactgtctggtactggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttcccggaaggccctgagcggctccatgccatcaaggagcagctgatc
caggagggactcctggaccgctgcgtgtccttccaggcccggttcgccgaaaaggaggag
ctgatgttggttcacagcctcgaatacattgatctgatggagacgactcaatacatgaat
gagggagaactccgcatcctggcagacacctatgactcagtttacctgcatccgaactcg
tacacctgtgcctgcctggcctcaggctccgtcctcaggctggtggatgcagtcctgggg
gctgagatccggaatggcatggccatcatcaggcctccgggacaccatgcccagcacagt
cttatggatggatattgcatgttcaaccatgtggccgtggctgcccgctatgctcaacag
aagcatggcatccagagggtccttatcgtggattgggatgtacaccatggtcaaggaaca
cagttcaccttcgaccaggaccccagcgtgctctatttctccatccaccgctacgagcag
ggtcggttctggccgcacctcaaagcctctaactggtccaccacaggttttggccaaggt
cagggatacaccataaatgtgccttggaaccaggtggggatgcgagatgccgactacatt
gctgctttcctgcaaatcctgctgccggtcacccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggcgagatggccgccactccg
gcagggttcgcccagctaacccatctgctcatgggtctggcaggaggcaggctgatcctg
tctctggagggtggctacaacctccgttccttggctgagggcgtcagcgcctcgcttcac
accctcctgggagacccttgccccctgctggaatcccctggcgccccctgcccaagtgcc
cagttgtcactgtcctgcactctggaagctctggagcccttctgggaggtccttgtgcga
tcagatgataccctggaggaggacagcgtggaggggaacaatgcggaggaagaggaggag
gaggagaggccgtggcagccccctgtgctcccggtcctgacgtggccagtgctgcaggct
cgcacagggctggtctatgaccaacggatgatgggtcactacaacttgtgggacaaccac
caccccgagatgccccagcgcgtctcacagatcatgtgccgtctggaggagctgggcctt
gccgagcgctgcctcatcctgcccacacgtcccgccacggatgctgagctgctcacctgc
cacagtgctgagtatgtgggtcgtctacgggccacagagaagatgaaaacccgggagctg
caccgcgaaggtgccagctttgactccatctacatctgccccagcaccttcgcctgtgca
aagctggccactggcgccacatgctgccttgtggaagctgtgctggcgggagaggttttg
aatggtgttgccgtggtgcgtcctccaggacaccacgcagagcaggacgctgcttgcggt
ttctgctttttcaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat
gcgctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata
tttgaggaggaccccagcatactctatgtttccctgcaccgctatgatcatggcaccttc
tttcccatgggggatgagggtgccagcaaccaggtgggctgggctgcaggcatgggcttc
accgtcaacgtggcctggaatgggccccgcatgggtgacgccgagtacctggctgcctgg
catcgtctggtgcttcccattgcctacgagtttaacccagaactggtgctagtctcagct
ggctttgacgcggcacggggggacccactggggggctgccagttgtcacctgagggctat
gcccacctcacgcacctgctgatgggccttgccagtggccgcattatcctaatcctagag
ggtggctataacctgacatccatctcggaatccatggccgcctgtacccgcaccctcctt
ggggacccaccacctgtgctgaccctgccacggcccccactatcaggggccctagcctca
atcgctgagaccatccaagtccatcgcagatactggcgcagcttgcgggtcatgaaggtg
aaagacaaggagggaccttccagttctaagttgatcaccaaggaagcaccccaaccagcc
aatcctgggtcagccgaggggctgaccacactagaggggaatattctggacacaagcatg
gggaagaccaccttggcatcatctgtgcaagagtccactccaccccagaccaagtcagaa
gcagctgtggcagagctcactcaggaccagtcctcagaggcagccgtgccggacccgacc
acctcagagggagccgtgtcggacccgaccacctcagagggagccgtgccggacccgacc
acctcagagggagccgtgccggacccgaccacctcagagggagccgtgccggacccgacc
acctcagaggaggccgtgggaggagctgagctgatccaaacctgtccagctttgtgcaca
gacaaccagactcctccagcctcacctgtgcaaggagccacacctcagagctcccccact
aagcttactgggattctcaggatcttggaactagacaacaaggctcaggggtccccacaa
cctcagatcccagaagaggagaggctactaggagaggcagctggaggtcaggacgtggat
gattcagtgttgatgcaggtctttggggacactgaccaggccatgttttacgctgtgaca
ccactgccctggtgtccccatttggtggcagtctgccccattcctgaagcaggcctggac
gtgacccaaccctgtcaggactgtggagaattccaggagaactgggtgtgtctgtcttgc
tatgaggtctactgcagtcgttacgtcaatgcccatatgctccagcaccatgaagcctcg
ggacacccgctggtcctcagctatgttgacctttctacctggtgttaccaatgtcaggcc
tatgttcaccaccaggctgtcctagatgtgaagaacgtcgcccaccagaacaagtttggg
gaggacatgccccactcacactaa
DBGET
integrated database retrieval system
