Rhinolophus ferrumequinum (greater horseshoe bat): 117026250
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Entry
117026250 CDS
T07722
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04151
PI3K-Akt signaling pathway
rfq04382
Cornified envelope formation
rfq04510
Focal adhesion
rfq04512
ECM-receptor interaction
rfq04820
Cytoskeleton in muscle cells
rfq04926
Relaxin signaling pathway
rfq04933
AGE-RAGE signaling pathway in diabetic complications
rfq04974
Protein digestion and absorption
rfq05146
Amoebiasis
rfq05165
Human papillomavirus infection
rfq05200
Pathways in cancer
rfq05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117026250 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117026250 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117026250 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117026250 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
117026250 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
117026250 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
117026250 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117026250 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
117026250 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117026250 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
117026250 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117026250 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfq04147
]
117026250 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
rfq00536
]
117026250 (COL4A5)
Exosome [BR:
rfq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117026250 (COL4A5)
Glycosaminoglycan binding proteins [BR:
rfq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117026250 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117026250
NCBI-ProteinID:
XP_032968760
Ensembl:
ENSRFEG00010022067
LinkDB
All DBs
Position
X:complement(45689084..46059649)
Genome browser
AA seq
1463 aa
AA seq
DB search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NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaaatttccagggacccaagggtgaaaagggtaatcaaggtcttcagggccct
cctgggccacctgggcagatcagtgaacagaaaaggccaattgatgtagagtttcagaaa
ggagatcagggacttcctggtgacctggggcctcctggacctccaggaatgcgtggtcct
ccaggtcttccaggtggtgtgaaaggtgagaaaggggaacaaggagagcctggcaaaaga
ggtaaaccaggtaaagatggagagaatggccaaccaggaattccgggtttgcctggtgat
cctggttaccctggtgaaccaggaagggttggagaaaagggccaaaaaggtgacattggc
ccaactggccctcctggacttgtaattcctaggcctgggactggtgtaacagtaggagaa
aaaggaaacattgggttacctggattgcctggagaaaaaggagagcgtggatttcctgga
atacagggtctgcctggccttcctggacctccagggactgcatttatgggtcctcctggc
ccccctggctttcctggagaaaggggccaaaaaggtgatgaaggtcctcctggaatttcc
attcccggatctcctggacttgatggacagccggggtctcctggccttccagggcctcct
ggccctccaggcccttacatccctcctagtggtgacatatgtgaagcaggccctccaggc
cctccaggatctccaggtgatagaggactccaaggagaacaaggagtaaaaggtgacaag
ggtgacacctgcttcaactgtattggaaccggtatttcagggcccccaggtcaacctggt
ttgccaggtattccaggtcttccaggatctcctggtttccctggacagaagggtgaaaaa
ggacacactggtgcaactggtcccaaaggattaacaggcataccaggagctccaggtgct
ccaggctttcctggacctaaaggtgaacctggcgacatcctcactttttcaggaatgaag
ggtgacaaaggggagttgggttttcctggagccccaggactccctggtttacctggcacc
cctggtcaagatggattggcaggacttcctggacgcaaaggagaacctggtggaattgct
tttaagggtgaaagaggtccccctggaaacccaggtttgccaggtctcccagggaatagg
ggtcctatgggccctattggtattggacctccaggcgcagtaggtgaaaaaggcatacaa
ggtgtggcaggaaatccaggacagccaggaataccaggtcctaaaggtgatccaggtcag
accataacccagccgggcaagcctggcctacccggtatccctgggagagacggtgaagta
ggttttccaggtgatcctggtctcccaggccacccaggcttgccaggaatgccaggtagc
aaaggagaaccaggtatccctggaatcgggcttcctggaccacctggtcccaaaggtttt
cctggaattccaggacctccaggagcacctgggacacctggaagaatgggtctagacggc
cctcctgggccaccaggcattccaggactgaagggagaaccaggatttgggctacctggg
ccacctgggcctccaggactcccaggtttcaaaggaacacttggtccaaaaggagatcga
ggtttcccaggacctccaggtcttccaggacgcactggcttggatgggctacctggacca
aaaggtgatgttgggccaaatggacaacctgggtcaatgggacctcctgggcttccagga
ataggtgttcagggaccaccagggccaccagggattcctggaccaataggtcaacctggc
ttgcctggaataccaggagagaagggggatccagggcctcctgggtttgatgttccagga
ccccctggtgagagaggtagtccagggatccctggagcgcctggtcctatgggaccacca
ggatcaccagggcttcccggaaaagcaggtgcctctggctttccaggtgccaaaggtgaa
atgggtatgatgggacctccaggcccaccaggacccttgggaattcctggcaggagtggt
gttcctggtctcaaaggtgatgatggtttgcacggtcagccaggatctcctggtgctaca
ggagaaaaaggtagtaaaggagagcctggccttccaggccctcctggacgaatggatcca
gatcagctggtctcaaaaggcgagaagggggaccctggtttaccaggtattcctggactt
tcggggccaaaaggttaccagggtttgcctggagatccggggcaacctggactgagtgga
caacctggattaccaggaccaccaggtcccaagggtatccctggtctgcctggaaagcca
ggacttacaggacctcctggacttaaaggaaacataggtgatatgggttttccaggccct
catggtgtgaaagggtctcctggtacccctggagttcctggacaacctggctccccagga
ttacctggacagaaaggagaaaaaggtgatcctggtgcttcaggcattggtcttccaggt
cttccgggcccaaagggtgaacctggtctgcctggatacccagggaaccctggtatgaaa
ggttctgttggagatactggtttgcccggattaccaggaacccctggagcaaaaggacaa
ccaggccttcctggattccctggaactccaggccttcctggaccaaaaggcattaatggt
cctcctgggaaccctggacttccaggagaacctggtcctataggtggtggaggtcgtcct
gggccaccggggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggacct
gctggacagaagggtgaaccaggacaaccaggttttggaatcccaggaccccctggactc
ccaggactttctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggc
cttccaggtccaaagggtgaaccaggcttccagggtttacctggtgtgcagggtccccca
ggccctcctggttctccgggtccagctctggaaggccctaaaggcaaccctgggccccaa
ggtcctcctggaagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtctc
cggggtctccctgggaatggagttattaaaggagagagaggaaacccaggccaacctggg
caacctggtttgcctggtttaaaaggagatcaaggaccaccaggactccagggtaatcct
ggccggccaggtctcaatggaatgaaaggagatcctggtctccctggtgtcccaggattt
ccaggcatgaaaggacccagtggattacctggttcaactggccctgaggggcatccaggc
cctattggccccccaggtccccctggattacctggtccttcaggacagagtattataatc
aaaggagatgcaggtcctccaggggccccaggccagccaggatttaaaggtctgccagga
ctaccaggacctccaggattaccaggtccaattggccctccaggagatcctggacgcaat
ggactccctggctttgatggtgcagtagggcgcaaaggagacccaggtctcccaggccag
ccaggtacccgtggtttggatggcccccctgggccagatggattgcaaggtcccccaggt
ccccctggaacttcctctgttgcccatggattcctcatcacacgtcacagccagacaaca
gatgcaccacaatgcccacagggaactgtccatatttatgaaggcttttctctcctctat
gtacaaggaaatgaaagagctcacggtcaagacttgggaacagccggcagctgccttcgt
cgcttcagtaccatgcctttcatgttctgcaacatcaataatgtttgcaactttgcttca
agaaatgactattcttattggctctccactccagagcccatgccaatgaacatggagccc
ctgaaaggccagagcatccagccattcattagtcggtgtgcagtgtgcgaagctccagct
gtggtgattgcagttcacagtcagaccatccagattcctcgttgtcctcagggatgggat
tctctctggattggttattccttcatgatgcacacaagtgcaggggcagagggctcaggt
caagccctggcctcccctggttcctgtttggaagagtttcgttcagctcccttcattgaa
tgccatgggcggggtacctgcaattattatgccaactcctacagcttttggctggcaact
gtagatgtgtcagacatgttcaggtcaaatacctatacaacaactgactgtccaatttgt
tttgaggagtga
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integrated database retrieval system
