Rhinolophus ferrumequinum (greater horseshoe bat): 117026653
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Entry
117026653 CDS
T07722
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04330
Notch signaling pathway
rfq05017
Spinocerebellar ataxia
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117026653 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117026653 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
117026653 (ATXN1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117026653
NCBI-ProteinID:
XP_032969452
Ensembl:
ENSRFEG00010013033
LinkDB
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Position
9:78033429..78418167
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AA seq
808 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKVTVLPSDNHRAEGVAWLPGNPGARGHGGGRH
GPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPATTTLPTVYPPPQSGTPVSPVQY
AHLPHTFQFIGSPQYSGPYAGFIPSQLISPTASPVTSAVASAAGATTPSQRSQLEAYSTL
LANMGSLSQASGHKAEQQQHLGRTPGLIAPGSPPPTQQNQYVHIASSPQNAGRTASPPAI
PVHLHPHQTMIPHTLTLGPSPQVVVQYTDSGSHFVTREATKKAESSRLQQAMQAKEILNG
EMEKGRRYGAPTSADLGLVKAGSKPAPHPYESRHVVVHPGPADYGGRESSGVRASVMVLP
NSNTPTADSEVQQVTHREASPSTLNDKGGLHLGKPGHRSYALSPQQALGPEGVKAASVAT
LSPHTVIQTTHSASEPLPVGLPATAFYTGTQPPVIGYLSSQQQAITYAGSLPQHLVIPGT
QPLLIPVGSADVEGSGAASAIVTSSPQFAAVPHTFVTTALPKSENFSPEALVTQAAYPAM
VQAQIHLPVVQSVASPAVAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISND
LKIDSSTVERIEESHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQ
LFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKTDTLTGSRHRYAEQE
NGINPGSAQMLSENGELKFPEKLGLPAAPLLTKTEPSKPTATRKRRWSAPETRKLEKSED
EPPLTLPKPSLIPQEVKICIEGRSNVGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccttcggaggagaaggtcacggtcctgcccagtgacaaccaccgggcg
gagggcgtggcatggctcccaggcaaccctggtgcgcgaggccacgggggcgggaggcat
ggcccggcggggacttcagtggagcttggtttacaacagggaataggtttacacaaagcg
ctgtccacggggctggactactccccacccagcgcacccaggtctgtcccggcgaccacc
acgctgcccacggtgtaccctcccccgcagtcagggactccggtgtcgcctgtgcagtac
gctcacctgccgcacactttccagttcattgggtccccccagtacagcgggccctacgca
ggattcatcccttcacagctcatctccccaacggccagcccagtcaccagtgcagtggcc
tctgccgcgggggccaccactccatcccagcgctcccagctggaggcctattccactctg
ctggccaacatgggcagtctgagccaagcctcaggacacaaggctgagcagcagcagcac
ttaggcaggactccggggctcatcgcgccagggtccccaccacccacccagcagaaccag
tacgtccacattgccagctctccacagaacgccgggcgcacggcctctccgccagccatc
cccgtccacctccacccccaccagacgatgatcccacacacgctcaccctggggccttcc
cctcaggtcgtagtgcaatacactgactctggcagccactttgttactcgggaggccacc
aagaaagctgagagcagcaggctgcagcaggccatgcaggccaaggagatcctgaacggg
gagatggagaagggccgcaggtacggggctcccacctcagcagacctgggcctggtgaag
gccggcagcaagccagctccgcacccgtacgagtcccggcacgtggtcgtccaccctggc
cccgccgactatggcggtcgggagtcctcaggggtccgcgcctccgtgatggtcctgccc
aacagcaacacacccacagctgactcggaagtgcagcaggtcacacaccgcgaggcctcg
ccctccaccctcaacgacaaaggtggcctgcatttagggaagcccgggcaccgatcctac
gcgctctcaccccaacaggctctgggccccgaaggcgtgaaggccgcctccgttgccacg
ctgtcaccccacactgtcattcagaccacacatagtgcttcggagccactcccagttggg
ctgccagccacggccttctacacggggacgcagccgcctgtcatcgggtacctgagcagc
cagcagcaagcgatcacatacgcgggcagcctgccccagcacctggtcatcccgggcacc
cagcccctgctcattccggttggcagtgctgacgtggaggggtcgggagcagcctctgcg
atagtcacctcgtcgccccagtttgcagcagtgcctcacacgttcgtcaccaccgccctt
cccaagagcgagaacttcagcccagaggccctggtcacccaggccgcctacccggccatg
gtgcaggcccagatccacctgcccgtggtgcagtcggtggcctccccagcggtggccccc
cccacactgcccccctacttcatgaaaggctccatcatccaattggccaatggggagctg
aagaaggtggaggacttgaaaaccgaagatttcatccagagtgcagagatcagcaacgac
ctgaaaatcgactccagcaccgtggagaggattgaggagagccacagcccgggcgtcgct
gtgatccagttcgccgtcggggagcaccgggcacaggtcagcgtggaggttttggtagag
tatcctttttttgtgtttggacagggctggtcatcctgctgtccagagagaaccagccag
ctctttgatttgccgtgttccaaactctccgttggggatgtctgcatctcgctgaccctc
aagaacctgaagaacggctctgttaaaaagggccagcccgtggatcccgccagcgtcctg
ctgaagcactcaaagaccgacaccctgacgggcagtagacacaggtatgctgagcaggaa
aacgggatcaatccgggaagtgcccagatgctctctgagaacggcgaactgaagtttcca
gaaaaactaggattgcctgccgcgcccttgctcaccaaaacagaacccagcaagcccaca
gcaacgaggaagaggaggtggtctgcgccagagacccgcaaactggagaagtcagaagac
gagccacctttgactcttcctaagccttctctaattcctcaggaggttaagatttgcatt
gaaggccggtctaatgtaggcaagtag
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