Rhinolophus ferrumequinum (greater horseshoe bat): 117027347
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Entry
117027347 CDS
T07722
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03013
Nucleocytoplasmic transport
rfq03250
Viral life cycle - HIV-1
rfq05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117027347
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117027347
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117027347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117027347
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117027347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
117027347
NCBI-ProteinID:
XP_032970888
Ensembl:
ENSRFEG00010011880
LinkDB
All DBs
Position
9:77281192..77353024
Genome browser
AA seq
1477 aa
AA seq
DB search
MASGAGGVGGGGGGKIRSRRCHQGPIKPYQQGRQKHQSIFNRLTESVKNIVPQWLQNYFS
RNEDVCTCSAVRREAPQGPKNREDDHLICADEESANIRRGRITPEPTLSNTEDTSTTTTS
NFPHVVMSPSLHRNHLNFSMSESPALPSQRLTSSFPRGSSQISVVKEMKDSASQHDNGNI
STTSGVSSRASAKDIAVSKNTSVPHLWSPEAERSHSFSQHTATSSKKPAFNVSAFGTLSS
SIGDSSILKTSELGDSPFYLGKIRYGGAVMVVRQPKVRNTPYQAPVRRQMKAKQLNAQSY
GVTSSTARRILQSLEKMSSPLADAKRIPSVSSPLNSPLDRTGIVASTDFWAKREKVDSNY
PPVQRLMIPKPVSIAANPTVYFKPSLMPFGELKKTNQIIDKNLSTGNERNMTPGQKKEQE
SGLSHPNFSISAANGLSSGVGSGGNNMKWGRTHIVATKPPEKEEMQIPVLPRITLPMTSS
SWPPIKFSSSVMTSSPSLISPAQSLTNKVQMTSSNNTGHPIFRFSSPIVKSTETDVLPPS
SIGFTFSLPVTKRAELSGSSSVSEPITSGSAQDTPAVKSSSCKKQLDEDFESPLRPAIIL
KEGSVLDVLKNPGFTSPKTDSLAAQPTTTDPVVYTRPAISSFSSSGIGCEESLKAGSSWQ
CDTCLLLNKVTDNKCVACQATKLPPSDTAKQTGIGTPSKSGRPTLCASGTGFGEKFKPAV
GTWECDTCLVQNKPEAIKCVACETPKPGTGFKRVLTLPVASESAVTVASSSSGCTVTTGA
LGFGDKFKRPVGSWECPVCCVYNNAEDKKCVSCMSEKPGRATPTSNSSSSTVPVSPSSGG
CLGLDKFKKPEGSWDCEICLVQNKADAVKCVTCESAKPGTNSDVFRIFEGFGASSSSLKP
AAPSFKFGISSSSSAPSQTLKRVGDVQFEGQGGLKIDVSSYPGSLNLMSEGFNSSKPTGD
FQCGVSSDSQRKEVKKDSKNDNNFKSGLSSALSHPSPLDPLQFGVSNLGQQEKKEEGPKA
SSVGFSSGAGVINPTPTATCSTVTSEDKGSFDSGATETKGASVAPFTCKTSEAKKEEMPT
AKGRFPFGSVDPAPVPSASFFVLGRTEEKQRDPVTATSPVFQKKSDKQEPKSQPVFSFGN
CEQTKDESSSKSTFSFSAAKPSEKKYEQPTKAMFALGSQTTAIADQSSAKPDLNFLNNSS
TNAGPPATSATGSLFGSSTSSSRAAVAASVYGKASPMSNSAFGDPAGSSTSQSLLLSEES
KPATTSSTGTTVTPFVFGPGASSNNTPTSGFNFGATTTSSTAGSSFVFGTGPSAPSASPS
FGVNQTPTFGQSQGASQPNPPGFGSLSSSGGLFSAGSQPAPPTFGTVSSSSHPPVFGQQP
GQSAFGSGAAPNSSSVFQFGSSTTNFNFTNNNPSGVFTFGANPSTPAASAQPSSSGGFPF
NQPSAAFTVGSNGKNMFSSPGTSVPGRKIKTAVRRRK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggagtaggagggggcggtggcggcaagatacggtcgcggcgt
tgccatcaggggccaattaagccttaccagcaagggcgacaaaagcaccagagtattttt
aacaggttgacagaatctgttaagaatattgtgccacaatggctacagaactactttagc
aggaatgaagatgtatgcacctgctcagcagttagaagagaggcaccacaggggccgaaa
aatagagaagatgaccatctgatatgtgctgatgaggagagcgctaatattcgccgtggc
agaatcactcctgagccaacactcagtaacacggaagatacctcaacaactactacttca
aattttccacatgtagtaatgagcccttctcttcatcggaaccatctgaatttctccatg
tcggaatctcctgcattaccctctcagcgtttgacatcctcattcccaaggggcagttct
caaatttccgttgtgaaggaaatgaaagattctgcctctcagcatgacaatggtaacatc
tcaactaccagtggtgtttcttcaagagcttctgctaaagatatagctgtttcaaagaac
acttcagtgccacatctgtggtccccagaggctgaacgttctcattcattttcacagcac
actgccaccagctccaaaaaaccagcatttaacgtatcagcttttggaacactttcctct
tcaattggggactcttcgatccttaaaacaagtgagcttggagattctcctttttacctt
ggcaaaataaggtatggtggggcagtgatggttgtcagacagcctaaagtacgaaacaca
ccatatcaggcaccagtcagaagacagatgaaagctaagcaactcaatgcacaatcttat
ggtgtgactagttcaacagctcggcgaatattacagtctttagagaagatgtcaagtcct
ctagcggatgcaaaaagaattccatctgtttcttctccactgaattctcctcttgatagg
actggaatagttgccagcacagatttttgggccaaaagggaaaaggtggactctaattat
cctcctgttcagagactaatgatcccaaagccagtctccatagcagcaaatccaactgtt
tattttaaaccatctctgatgccatttggtgaattaaagaagactaatcaaataatagat
aaaaacctcagtaccggaaatgaaagaaatatgacaccaggacaaaagaaagaacaagaa
agtggtttatctcacccaaatttcagtatatctgcagccaatggtttatcttctggagta
ggtagtggaggtaacaacatgaaatgggggagaacacacattgtggcaactaaaccccca
gagaaggaggaaatgcaaataccagtattaccgagaatcactttacccatgaccagttct
tcatggcctcccataaaatttagttcatctgtgatgacttcttctccatcactgattagt
cctgcacagtcattaacaaacaaggtacaaatgacctcttcaaacaacactggccatcct
atattcagattttcatctccaattgtaaaatctactgagacggatgtactacctccatca
tctattggatttacatttagtttgcctgttacaaaaagagcagaactttctggctctagt
agtgtttcagaaccaattacaagtggttcagctcaagatacccctgcagtgaagagttca
agctgtaagaagcagttagatgaagattttgagagccctttgagacctgctataatcttg
aaagaaggaagtgtcctagatgttttgaaaaaccctggtttcacatcaccgaagacagat
tctcttgcagctcagcctaccaccacagacccagtagtatatacaagaccagcaataagt
agtttttcttctagtggaattgggtgtgaggaaagcttaaaagctggatcgtcatggcag
tgtgatacttgtctactcctgaacaaagttacagacaacaagtgcgtcgcctgtcaagca
acaaaattgccaccaagcgatactgctaaacaaactggaattggaacaccaagtaaaagt
ggcagaccaactctttgtgcatctgggacaggttttggagagaaatttaaaccagcagta
ggaacttgggagtgtgatacctgtttagtgcaaaataaaccggaagcgataaaatgtgta
gcttgtgaaacaccaaaacctggaactggttttaagcgagtccttacattgccagtggct
tcagaaagtgctgtaaccgtggcttcttcatcttcaggctgcactgtgaccactggtgcc
ttaggatttggagataaattcaaaaggcctgtgggatcttgggagtgtccagtatgctgt
gtttataataatgcagaagacaagaaatgtgtgtcctgtatgtctgagaaaccaggccgt
gcaacaccaacctcaaattcaagtagcagcactgtccctgtgtcgccatcctctggaggc
tgcctaggattggacaagttcaagaaacctgagggaagctgggactgtgaaatttgccta
gtgcagaataaagcagatgcggtaaaatgtgtaacctgtgaaagtgcaaagccaggcaca
aattctgatgtctttcgtatttttgaaggttttggggcatcttcctcatctttgaaacca
gcagccccatccttcaaatttggtatctcgtcgtcctcatctgcgccttcgcagacttta
aaacgtgttggagatgttcaattcgaaggtcagggaggcttgaaaatagatgtgtcatca
tatcctgggtctttgaaccttatgagtgaaggcttcaattcttctaaaccaacaggagat
tttcaatgtggagtttcatctgattctcaacgtaaagaagttaaaaaggacagtaagaat
gataataattttaagtctgggctttcttctgctttaagccatccatctcctttagaccca
cttcagtttggggtgtctaatcttgggcagcaagaaaagaaggaggaaggacccaaagct
tcatctgtaggctttagctctggtgcgggagttattaaccccacccctactgctacctgc
tccacagtgacctctgaggacaagggcagcttcgactctggagccacagaaaccaagggt
gcctcggtggctcctttcacatgtaagacgtcagaagcaaaaaaagaagaaatgcctact
gccaaaggacggttcccttttggcagtgtggaccctgcccctgtgccatcggcttcattc
tttgttttgggaaggacagaagagaagcagcgagaccctgtcactgctacttctccagta
tttcagaagaagtctgacaaacaagaaccaaagagtcaaccagtgttttcctttgggaat
tgtgagcaaaccaaagatgagagttcttcaaagtcgacctttagtttcagtgcggcaaaa
ccatctgagaagaaatatgaacagccaacaaaggccatgtttgctcttggatctcaaacc
actgctatcgctgatcaaagttctgcaaagcccgatttaaatttcttgaacaacagttcc
actaatgcaggtccaccagccacttcagctactggcagcctatttggcagttccacgtcc
tcctccagggcagctgtggctgcctctgtgtatggaaaggccagcccaatgagcaactca
gcctttggggacccagccggatccagtacgtctcagtctttgctcttgtctgaagagagc
aaaccagcaaccacatctagcacgggtactactgttaccccatttgtctttggtcctgga
gccagtagtaataatacaccaacgtctggtttcaactttggagctacaaccacatctagc
acagcaggatcctcctttgtatttggcactggaccttcagcaccatctgccagtccatca
tttggtgtgaaccagactccaacgtttggacaaagtcaaggtgccagccagccgaatccc
ccaggctttggatctctatcatcttctggaggattattttctgctggttctcagcccgca
ccacctacttttgggacagtgtcaagcagtagtcatccacccgtgtttggacaacagcct
ggtcagtctgcatttggctctggagcagctcctaattccagttcagttttccagtttggc
agcagcactacaaattttaacttcaccaacaacaatccatcaggagtattcacatttggt
gcgaatcctagcacacctgcagcctcagcccagccttccagctcagggggctttccattc
aatcagccatcagcagcatttacagtggggtcaaatgggaaaaatatgttctcttctcct
ggaacttcagttcctggtcgcaagataaagactgctgttagacgcaggaaataa
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