Rhinolophus ferrumequinum (greater horseshoe bat): 117028208
Help
Entry
117028208 CDS
T07722
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03082
ATP-dependent chromatin remodeling
rfq04714
Thermogenesis
rfq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117028208 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
117028208 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
117028208 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117028208 (SMARCD1)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117028208 (SMARCD1)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117028208 (SMARCD1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117028208 (SMARCD1)
PBAF complex
117028208 (SMARCD1)
GBAF(ncBAF) complex
117028208 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
117028208
NCBI-ProteinID:
XP_032972413
Ensembl:
ENSRFEG00010013850
UniProt:
A0A671FEI6
LinkDB
All DBs
Position
10:50887658..50899877
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVTCDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggagcggcggctgccttgggcccgggcgggactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tacggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
attatgaggaaacggctcgatatccaggaggccttgaaacgacccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaagcaaaagaggaagttctcttccttttttaagtccttg
gtgatcgagctggacaaagacctgtatgggccagacaaccatctggtggaatggcacagg
accgccactacccaggagacagatggcttccaggtgaaacggccaggagacgtgaatgta
cgctgtactgtcctactgatgctggattaccagcctccgcagtttaaattagaccctcgg
ctggctcgcctcttgggcattcacacccagacccgcccagtgatcattcaagccctgtgg
caatatattaagacccacaagctccaggaccctcacgaacgggagtttgtcacctgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagatcccccagcgg
ctccacgccttgcttatgccaccagagcccatcatcattaatcatgtcatcagtgttgat
ccgaatgatcagaaaaagacggcttgttacgacattgatgtggaagtggatgatactttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactctg
gacaacaagatccacgagacaatagaaactatcaatcagttgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcattaacgactggctgcagtcccaatgc
cgggacctcaagaccatgaccgacgtggtgggtaacccagaggaagagcgccgagctgag
ttctacttccagccttgggcccaggaggccgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctggggatccgaaatacatag
DBGET
integrated database retrieval system
