KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117028290
Entry
117028290         CDS       T07722                                 
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117028290 (SCN8A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rfq04040]
    117028290 (SCN8A)
Ion channels [BR:rfq04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   117028290 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel IQ_SCN5A_C IQ GPHH Lustrin_cystein HB_ELP1 FAM86
Other DBs
NCBI-GeneID: 117028290
NCBI-ProteinID: XP_032972557
Ensembl: ENSRFEG00010017085
LinkDB
Position
10:51904781..52067306
AA seq 1980 aa
MAGRLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNDSYLENGTKGF
DWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRKTVFRRPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIG
GRLLPEGTTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLVEELEESQRKCP
PCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQ
FEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLSDVEGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKECVCKINVDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMV
MVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKVKVRAFMQ
AHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIID
EDHMSFINNPNLTVRVPIAVGESDFENVNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIK
PEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWF
ETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFF
TNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNAL
VGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEERFEIEIVNNKTDCEKLM
EGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPEEQPKYEDNIYM
YIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLV
FVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIR
LARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEA
GIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS
VGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDAT
QFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSG
ELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSVVVLQRAYRGHLARRGFICKKT
TSNKLENGGTHQEKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKEVRESKC
NT seq 5943 nt   +upstreamnt  +downstreamnt
atggcagggcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcgctggcaaacattgagaggcgcattgctgagagcaagcttaagaaaccaccaaaggcc
gatggcagtcatcgggaagacgatgaggacagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctacggggacatcccacaaggcctggtcgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgactggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcactagtgaaaatcatcgcaaga
ggtttctgcatagatggctttacctttctacgggatccatggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatt
gtgggggccctaattcagtctgtgaagaagctgtcagatgtcatgattctgacagtgttc
tgcctgagtgtgtttgccttgatcggactgcagctgttcatgggcaacctgcgaaacaag
tgtgttgtgtggcccataaacttcaatgatagctacctggaaaatggcaccaaaggcttt
gactgggaagagtatatcaacaataaaacaaatttttacacggttcctggcatgctagaa
cctttactctgtgggaacagttctgatgctgggcaatgcccagagggataccagtgtatg
aaagcaggaaggaaccctaactatggttacacaagctttgacactttcagctgggccttc
ttggcgttatttcgccttatgacccaggactattgggaaaacctgtatcaattgacttta
cgagcagctgggaaaacatacatgatcttcttcgtcttggtcatctttgtgggttctttc
tatctggtgaacttgatcttggctgtggtggccatggcttatgaagagcagaatcaggca
acactggaggaggcagagcagaaagaggctgaattcaaagcaatgttggaacaacttaag
aagcaacaggaagaagcacaggctgccgcgatggccacttccgcaggaactgtctcagaa
gacgccatagaggaagaaggggaagaagggggaggctctcctcggagctcatctgaaatt
tctaaactcagttccaagagtgccaaggaaagacgtaacagaagaaagaagaggaagcaa
aaggaactctcagaaggagaggagaagggggatcccgagaaggtgtttaagtcagagtca
gaagatggcatgcggaagacggtcttccgacggccagacaacaggatagggaggaaattc
tccatcatgaatcagtcactgctcagcattccgggctccccattcctctcccgccacaac
agcaagagcagcatcttcagcttcagggggcccgggcggttccgggaccccggctccgag
aacgagtttgcggacgacgagcacagcacagtggaggagagcgagggccgccgggactcg
ctcttcatcccgatccgagcccgcgagcgtcgcagcagctacagcggctacagcggctac
agccagggcagccggtcctcgcgcatcttccccagcctgcggcgcagcgtgaagcgcaac
agcaccgtggactgcaacggcgtggtttccctcatcggcggccccggctcccacatcggc
gggcggctcctgccagagggtacaactgaggtggaaattaagaagaaaggccctggatct
ctcttagtttccatggatcaactggcctcctatgggcggaaagacaggatcaacagtata
ctgagtgttgttacaaatacactagttgaagagctggaagagtctcagagaaaatgccca
ccatgctggtataaatttgccaatactttcctcatctgggagtgtcacccctattggata
aaactaaaagagattgtgaacttgattgtaatggacccttttgtggacttggccatcacc
atctgcattgtcctgaatacactgtttatggcaatggagcaccatcctatgacgccacaa
tttgaacatgtcttatccgtaggaaacctggttttcactggaattttcacagcagaaatg
ttcctgaagctcatagccatggatccctactattatttccaagaaggttggaacattttt
gacggatttattgtctccctcagtttaatggaactgagtctatcagatgtggaggggctt
tcggtgctgcgatctttccgattgctccgagtcttcaaactggccaaatcctggcccacc
ctgaacatgctgatcaagatcattggcaattccgtgggtgccctgggcaacctgaccctg
gtgctggccattatcgtgttcatcttcgccgtggtgggcatgcagctcttcggaaagagc
tacaaagagtgtgtgtgcaagatcaacgtggactgtgaactcccgcgctggcacatgcat
gacttcttccactccttcctcattgtcttccgagtgctgtgtggggagtggatcgagacc
atgtgggactgtatggaggtggccggccaggccatgtgcctcatcgtcttcatgatggtc
atggtgatcggcaacctggtggtgctgaacctgtttctggccttgctcctgagctccttc
agtgcagacaatctggccgccacagacgatgatggggaaatgaacaacctgcagatctca
gtgatccgtatcaagaagggtgtggcttggaccaaagtgaaagtgcgtgccttcatgcag
gcccacttcaagcagcgtgaggccgatgaagtgaaacctctggacgagctgtatgaaaag
aaggccaactgcatcgccaaccacaccggtgcagacatccaccggaatggggacttccag
aagaatggcaatggcaccaccagtggcattggcagcagcgtggagaagtacatcattgat
gaggaccacatgtccttcatcaacaatcccaacttgactgtgcgggtgcccattgctgta
ggcgagtctgactttgagaacgtcaacacagaggacgtcagcagcgagtcggatcccgaa
ggcagcaaagataaactggatgataccagctcctctgaaggaagcaccatcgatatcaaa
ccagaagtagaggaagtccctgtggaacagcctgaggaatacttagacccagacgcctgc
ttcacagaaggttgtgtccagcgattcaagtgctgccaggtcaacattgaagaagggcta
ggcaagtcttggtggatcctgcggaaaacctgcttcctcattgtggagcacaattggttt
gagaccttcatcatcttcatgattctgctcagcagtggcgccctggccttcgaggatatc
tacatcgagcagagaaagaccattcgtaccatcctggagtacgctgacaaagtcttcacc
tatatcttcatcctggagatgttactcaagtggacagcctatggcttcgtcaagttcttc
accaatgcctggtgctggctggacttcctcatcgtagctgtctctttagtcagccttgta
gctaatgccctgggctactcggaactaggtgccataaagtcccttaggaccctaagagct
ctgagacccttaagagccttatcacgatttgaagggatgagggtggtggtgaatgccttg
gtgggcgccatcccctccatcatgaatgtgctgctggtgtgtctcatcttctggctgatt
ttcagcatcatgggagtcaacctgtttgcgggaaagtaccactactgctttaatgagact
gcagaagagcgatttgaaattgaaattgtcaacaataaaactgattgtgaaaagctcatg
gaggggaacaatacagaaatcagatggaagaatgtgaagatcaactttgacaacgttggg
gctggatatctggcgcttcttcaggtggcaaccttcaaaggctggatggacatcatgtat
gcagctgtagattcccgaaagcctgaggagcagcctaagtatgaggacaacatctacatg
tacatctactttgtcatcttcatcatcttcggctccttcttcaccctgaacctgttcatt
ggtgtcatcattgataacttcaatcaacaaaagaaaaagtttggaggtcaggacatcttc
atgactgaagaacagaagaagtactacaatgccatgaaaaagctgggctccaagaaaccg
cagaaacccattccccgccccctgaacaaaatccaaggtatcgtctttgattttgtcact
caacaagcctttgacattgttatcatgatgctcatctgccttaacatggtgacaatgatg
gtggagacagatactcagagcaagcagatggagaacattctctactggattaacctggtc
ttcgtcatcttcttcacctgtgagtgtgtgctcaaaatgtttgccttgcggcactactac
ttcaccattggctggaacatcttcgacttcgtggttgtcatcctctccatcgtgggaatg
ttcctggctgatatcattgagaaatactttgtttctccaaccctcttccgagtcatccga
ttggcccgtattgggcgcatcctgcgtctgatcaaaggcgccaaaggtattcgtaccctg
ctctttgccttaatgatgtccttgcctgctctgttcaacatcggcctcctgctctttctg
gtcatgttcatcttctccatcttcgggatgtccaacttcgcttacgtgaagcacgaggcc
ggcatcgacgacatgttcaactttgagacgtttggcaacagcatgatctgcctgtttcag
atcaccacctcggcgggctgggacggcctgctgctgcccatcctcaaccgcccgccggac
tgcagtctggataaggagcacccggggagcggctttaagggagactgcgggaacccctct
gtgggcatcttcttcttcgtaagctacatcatcatctccttcctcatcgtcgtcaacatg
tacatcgccatcatcctggagaacttcagtgtggccacggaggagagtgcagaccctctg
agtgaggacgactttgagaccttctatgagatctgggagaagttcgacccggacgccacc
cagttcatcgagtactgtaagctggcagacttcgcagatgcgttggagcacccgctgcga
gtgcccaagcccaacaccatcgagctcatcgccatggacctgcccatggtcagcggggat
cgcatccactgcttggacatcctttttgccttcaccaagcgggtcctgggagacagcggg
gagttggacatccttcggcagcagatggaggagcggttcgtggcatccaatccttccaaa
gtgtcttacgagccaatcacaaccacactgcggcgcaagcaggaagaggtgtcggtggtg
gtcctgcagcgcgcctaccggggacatttagcaaggcggggcttcatttgcaaaaagaca
acttccaataagctggagaatggaggcacacaccaggagaaaaaggagagcaccccgtcc
acagcctccctcccatcctatgacagtgtaactaaacctgaaaaggagaaacagcaacgg
gcagaggaaggaagaagggaaagagccaaaagacaaaaagaggtcagagaatccaagtgt
tag

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