Rhinolophus ferrumequinum (greater horseshoe bat): 117028493
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Entry
117028493 CDS
T07722
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03082
ATP-dependent chromatin remodeling
rfq04714
Thermogenesis
rfq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117028493 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
117028493 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
117028493 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117028493 (SMARCC2)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117028493 (SMARCC2)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117028493 (SMARCC2)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117028493 (SMARCC2)
PBAF complex
117028493 (SMARCC2)
GBAF(ncBAF) complex
117028493 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
117028493
NCBI-ProteinID:
XP_032973027
Ensembl:
ENSRFEG00010008662
UniProt:
A0A671EM55
LinkDB
All DBs
Position
10:complement(55520821..55539482)
Genome browser
AA seq
1245 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
CSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDETRAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDTEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPTGAAGPPTVHSLAMA
PASVAPAPAGSGAPPGSLGPSEQIGQAGPTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPSDPTAPSPGTVTPVPPPQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtctctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaacgcaccgttaaccaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgactattgagaagtccttggtgcagaataattgcctgtctcgacca
aacatttttctgtgcccagaaattgaacccaaactgctaggaaaattaaaggacattatc
aagagacaccagggaacggtcactgaggataagaacaacgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttttgcactggggctactatcctgacagttacgacacctggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacacagataccttcaatgaatggatgaatgaggaggactatgaagtaaat
gatgataaaaaccctgtgtcccgccgaaagaagatttcagccaagacactgacagatgag
gtgaacagcccagattcagatcgacgggacaagaagggagggaactataagaagaggaag
tgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggtccc
tcaacaccttacaccaagtccaagcgtggccacagagaagaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaatgtagaagaggtgacattgcccaaaaca
gtcaacacgaagaaggactcggagtcagccccagtcaaaggaggcaccatgactgacttg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagactaagaacccggacctgcatgaggataacgtgactgaacag
acccaccacatcatcattcccagctacgcggcctggtttgactataacagtgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaacttcatgattgacacttaccggctgaacccccaagagtac
ctcacctccaccgcctgccgcaggaacctggcgggtgatgtctgtgccatcatgagagtc
cacgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagccggcca
acccccatggggcctccacccacctctcacttccacgtcttggcggacacgccctcaggg
ctggtccctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcacaacaaatgctcaacttccctgacaaaggcaaagagaaaccg
acagacatgcagaactttgggctgcgcacagacatgtacacaaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccactcgagagtggacagaacaggagaccctgctactc
ctggaggcactggaaatgtacaaagatgactggaacaaagtatcagaacacgtgggaagc
cgcacgcaggacgagtgcatcttgcatttccttcgtcttcccattgaagacccatacctg
gaggactcagaggcctctctgggccccctggcctaccagcccatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcttctgttgtcgatcctcgagtcgcc
tctgctgctgcaaagtcggccttagaagagttctccaaaatgaaggaagaggtacccaca
gccttggtggaggcgcatgttcgaaaagtggaagaagcagccaaagtgacaggcaaggca
gacccagccttcggtctggaaagcagtggcattgccggaaccacctctgatgagcctgag
cggattgaggagagtgggactgacgagacgcgagcagagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtagaggaagaagcaaaggagaag
accagtgaggctcccaaaaaggatgaagagaaagggaaagaaggtgacagcgagaaggag
tcagagaagagcgatggggaccccatagttgacactgagaaggagaaggagccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcagagggggaaaggaagaccaaggtg
gagcgggacatcggtgagggcaatctctccactgctgctgctgctgccctggctgctgct
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaggagctg
gagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gaccgacaagccttccacatggagcagctgaagtacgcagagatgagggcccggcagcag
cacttccaacaaatgcaccagcagcagcagcagccaccgccagccctgcccccaggctcc
cagcctgtcccacctacaggtgctgctgggccacctaccgtccacagcttggctatggct
ccagcctcggtggcccctgctcctgctggcagtggggcccctcctggaagcttgggcccc
tctgaacagattgggcaggcagggccaactgcagggccacagcagcagcaaccagccgga
gccccccagcctggggcagtcccaccaggggtaccaccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgcctttcggcatgccgcctcctcct
cctcctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaac
ctcccccctcctcctaacctgcatgggcatcatcaccatctcccattcgccccgggcact
ctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggcacccctctgccttcagaccccacagccccgagcccaggcacagtgacccct
gtgccacctccacagtga
DBGET
integrated database retrieval system
