Rhinolophus ferrumequinum (greater horseshoe bat): 117028669
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Entry
117028669 CDS
T07722
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
117028669 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117028669 (PRDM4)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117028669 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
SET
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
PyrI_C
zf-met
Zn_ribbon_PriA
HypA
Motif
Other DBs
NCBI-GeneID:
117028669
NCBI-ProteinID:
XP_032973415
Ensembl:
ENSRFEG00010007783
LinkDB
All DBs
Position
10:13128201..13152251
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AA seq
698 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTASSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIASNPSALDPYQPSGNVGLEPGIVSIDSRSVNTHGAQSLHP
SDGHEVALDTTITMESVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
SNNLAADAVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDGALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTTWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
VGAEVGVWAGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVSHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGAPE
HPDVHLCNCGKECSSYAEFKAHLASHIHNHVPSQGHSGSHGSGHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCGKLFMRRQDLKQHVLTHTQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgactgca
tcctctgtgagcaatgccttgccagtctcagggagtcacctggggttggctgcctcaccc
actcacaatgccatccctgccccaggcctgccagtggcaattccaaacctgggtccctcc
ctgagctctctgccttctgctttgtctctgatgctcccaatggggatcggggatcgaggc
gtgatgtgcgggttacctgaaagaaactacaccctacctccaccaccttacccccacctg
gagagcagttacttccgaaccatcctacctggcattttgtcgtatttagctgacaggccg
ccgcctcagtacatccaccccaactccatcaacgtcgacggtaacacagcattatctatc
gccagtaacccttcagcactggatccttatcagcccagtggaaacgttggactggaacca
ggcattgtttcaatagactctcgctctgtgaacactcatggtgcccagagtctccatccc
agtgatggccacgaggtggccttggacaccacaatcactatggagagcgtctcccgggtt
accagccccatctctaccgatggaatggcggaggagcttacaatggatggtgttgcaggc
gagcattctcagatcccaaatggctccagaagtcacgaacctctgtcggtggattcggtg
agcaacaaccttgccgcagacgctgtgggacacggtggtgtgatacctattcatgggaac
ggcctggagctgcctgtggtcatggagacggaccacattgcaagtcgggtcaacgggatg
tctgacggggccctcagtgactccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatcggtttccctccatgaagtt
ggcctaagcctagaacctgtggctgtgtcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtatcgtcagacagtctttcttttgtaccaccttcgctgcaaatggaa
gactccaactcaaacaaggaaaatatggcaaccctgtttacaacttggtgcaccctctgt
gaccgagcctatccctcagactgccctgaccacggaccagtgacttttgttcctgacacg
ccaatagagagcagagcgagactttctctcccaaagcagcttgttctccgccagtcaatt
gtgggagcagaagttggcgtgtgggctggagaaaccattcctgtgcggacttgctttggg
cctcttattggccagcagagtcactccatggaggtagcagaatggacagacaaggcagtg
agccatatctggaagatataccacaacggtgtcctagaattctgcatcattacaactgac
gaaaatgaatgtaactggatgatgtttgtgcgcaaagccaggaaccgggaagagcagaat
ttggtggcttatccccatgatggaaaaatttatttctgcacctcacaagatattcctcct
gaaaacgaactgcttttttattacagccgggattatgctcagcagattggtgctcccgaa
cacccagatgtacacctgtgtaactgcggcaaggagtgcagttcttacgcagagttcaag
gcccacctggccagccacatccataaccatgtgcccagccagggccacagcggcagccat
gggtccggccacagcaaagaaaggaagtggaagtgttccatgtgccctcaggctttcatc
tctccttccaaacttcatgtccacttcatgggccacatggggatgaagccccacaagtgt
gacttctgcagtaaggctttcagtgatcccagcaacctgcgcacccacctcaagatacac
accggtcagaagaactaccggtgtactttgtgtgacaagtctttcacccagaaggctcac
ctggagtcacacatggttatccacaccggcgagaagaacctcaagtgtgattactgcggc
aagttgttcatgcggaggcaggacctgaagcagcacgtgctcacccacacgcagtaa
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