Rhinolophus ferrumequinum (greater horseshoe bat): 117028731
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Entry
117028731 CDS
T07722
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117028731 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117028731 (POLA1)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117028731 (POLA1)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
117028731 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
117028731
NCBI-ProteinID:
XP_032973519
Ensembl:
ENSRFEG00010002285
UniProt:
A0A671DQH0
LinkDB
All DBs
Position
X:complement(107108726..107391199)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAPVHGDDSVSDSGSFVVSRSRREKKSKKGRQEALERLKKAKAGEKYKYEVEDFTSVYEE
VDEEQYSRLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSREKGKDKAQNKEKR
NVKKAAVTKPNNIKSMFIASAGKKTTDKTVDLSKDGLLGDILQDLTTETPYTTPPPVITL
KKKRSIEAPMNPFSVHTPKAVPSGKTDPPVLRKEPPLTLVPLKRARFAAKPVPAPCPTAE
PVPAPCQQDQEESAAMDFDDADFDEPMDPEEVDTEPVAAKTREQESEPAKGVKAEADPQI
GTTSCIGSFLPDDSCWDIDREDDSSFSVQDVQVDSSKLPLVKGADEEQVLQFYWLDAYED
QYNQPGVAFLFGKVWIESAKTHVSCCVMVKNIERTLYFLPRETKIDLDTEKETGTPVTMK
DVYDEFDEKIATKYKIMKFKSKIVEKNYAFEIPDIPEKSEYLEVRYSAEIPPLPQNLKGE
TFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNPPISWCKVEAMVLKPVLVNVIKD
IGPPPLVVMSFSMKTMQNAKTHQNEVIAVAALVHYSFALDKAPPKPPFQSHFCVVSKPKD
CIFPYGFSEVIKKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRI
NVCKVPYWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSEL
VQQILKTERVVISMENVRNMYSEPSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNI
AGNIMSRTLMGGRAERNEFLLLHAFYENNYIVPDKQIFRKPQQKLVDEDEDIDGDTSKYK
KGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTE
GEEQEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKL
TANSMYGCLGFSFSRFYAKQLAALVTYKGREILMHTKDMVQKMNLEVIYGDTDSIMINTN
STNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTSDGNYATK
QELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVS
QFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKMKAGDTVSYVICQDGSNLSASQR
AYAPEQLQKQDSLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHC
LKEEENDDLRGGLAQLTDEEKYRDCERFKCPCPVCGTENIYDSVFEGSGTDMELSLYRCS
NINCNASPMNFLVQLNNKLILDIRRCIKKYYEGWLICEEPTCRNRTRRLPLQFSRNGPLC
QVCMKATLRPEYSDKSLYTQLCFYRYIFDVDCAMEKLITDHEKDKSRKPVLTPKVRDDYR
NLKNTVEHFLSQSGYTEVNLSKLFADCAVRS
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgtgcacggcgatgactctgtgtcagattcaggaagctttgtagtctctcga
tcccggcgagaaaagaaatcaaagaaaggacgccaggaagctctggaaagattgaaaaag
gctaaagctggtgagaagtataaatatgaagttgaagatttcacaagtgtgtatgaggag
gttgatgaagaacagtattcaaggctggttcaggcccgccaggatgatgactggatcgtg
gatgacgatggtatcggttatgtggaggatggccgagagatttttgatgatgaccttgaa
gatgacgcccttgattcccgtgagaaaggaaaagataaagcacaaaacaaagaaaagagg
aatgtaaagaaggctgcggtgacaaaaccaaacaatatcaagtcgatgttcattgctagt
gctgggaagaaaaccacagataaaactgtagacttgtccaaggatggtttgcttggtgac
attctacaagatctgaccaccgagacaccttatacaactccacctcctgtaataacactg
aagaaaaaacgatccatcgaggctccaatgaatcctttctctgtgcacactcccaaggca
gttccttcaggaaaaactgatccccctgtcttaaggaaggagcctcctttaactcttgtt
cctcttaaacgtgctcggtttgctgcgaagccagtgccggccccgtgtcctacagcagag
ccagtgccggccccgtgtcaacaagaccaggaggagtcagcggcaatggattttgacgat
gcagactttgatgagcccatggatcctgaggaggtggacacggagcctgtggctgccaag
actcgggaacaagagagtgagccagccaaaggggtgaaagctgaggcagatccccagata
gggaccacgtcctgcatagggagttttctaccagatgactcttgttgggacattgacagg
gaagatgacagcagtttttcagtccaggacgttcaagtggattccagtaaactcccgttg
gtaaagggggcggatgaggaacaagtgcttcagttttattggctggatgcctatgaagat
cagtacaaccagccaggtgtggcatttctgtttggtaaagtttggatcgaatctgctaag
acccatgtgagctgttgtgttatggtgaaaaacattgagcgaacgctttacttccttccc
cgtgaaacgaaaattgatctagacacagagaaagaaacaggaactccagttacaatgaag
gatgtttatgatgaatttgatgagaaaatagctacgaaatataaaattatgaagttcaag
tccaagatagtggaaaagaactatgcttttgagatacctgatattccagaaaaatccgag
tacttggaagttagatactcggctgaaataccaccacttcctcagaatttgaaaggagaa
actttttctcatgtatttgggactaacacatccagcttggagctgttcttgatgaacaga
aagatcaaaggaccttgttggctcgaagtaaaaaatccacaactcttgaatcccccgatt
agttggtgtaaagttgaggcaatggttttgaaaccagtcctggtgaacgtgattaaggac
atcggtcctcctccactcgtggtgatgtctttcagcatgaagacaatgcagaatgcaaag
acacatcaaaatgaggttattgctgtggcagctttggtccattacagctttgcattagat
aaagcaccgccaaagcctccctttcagtcacacttttgtgttgtgtctaaaccaaaggac
tgtatttttccatacggtttcagtgaagtcattaagaaaaagaatgtgaaggttgaggtt
gctgcaacagagaggacactgctaggttttttccttgcaaaagttcacaaaattgatcct
gatatcattgtgggtcataatatttatggatttgaactggaagtgttactacagagaatt
aatgtgtgcaaagttccttactggtccaagataggtcgactgaagcgatccaacatgcca
aagcttgggggcaggagtggatttggtgaaagaaatgccacctgtggccgaatgatctgt
gatgtggaaatttcagcaaaggaattgattcgttgtaaaagctaccatttgtctgaactt
gttcaacagattctgaaaactgaaagggttgtaatctcaatggaaaatgtacgaaatatg
tacagtgaaccatctcatctgttgtacctgttggaacacacctggaaagatgccaggttc
attttgcagatcatgtgtgagctaaatgttctgccattagcattgcagatcactaacatc
gctgggaacattatgtctaggacgctgatgggtggacgagctgagcgtaatgagttcttg
ttgcttcatgcattttatgaaaacaactatattgtgcctgacaagcagattttcaggaaa
cctcagcagaaactggtagatgaagatgaagacattgatggagataccagtaaatacaag
aaaggacggaagaaagcagcttatgctggaggcttggtattggaccctaaagttggtttt
tatgataagttcattttgcttctggacttcaacagtttatatccttccatcattcaggaa
ttcaacatttgttttacaacagtgcaaagagttgcttcagaggcacaaaaagttacagag
ggtgaagaacaagaacagatccctgagctgccagatccaagcttagaaatgggcatcttg
cccagagagatccggaaactggtagagcggagaaagcaagtcaaacaactaatgaagcag
caagatttaaatccagaccttgttcttcagtatgacattcgacagaaggcgttgaagctc
acggcaaacagcatgtacggctgcctgggattttctttcagcagattttatgccaaacaa
ctggctgctttggtgacatacaaaggaagggagattttgatgcatacgaaagacatggta
cagaagatgaatcttgaagttatttatggagatacagattcaattatgataaacaccaat
agcaccaatctggaagaagtatttaaattgggaaacaaggtaaaaagtgaagtgaataag
ttgtacaaactgcttgaaatagacattgatggaatcttcaagtctctgctactgctgaag
aagaagaaatatgctgctctggttgtggagccaacatcagatgggaattacgccaccaaa
caggagctgaaagggttagatatagttagaagagattggtgtgatcttgctaaagacact
ggaaactttgtcattggccagattctttctgatcaaagccgggacactatagtggaaaat
attcagaagaggttaatagaaatcggagaaaacgtgctaaatggcagtgtcccagtgagc
cagtttgaaattaacaaggcattgacaaaggatccacaggattaccctgataaaaaaagc
ctacctcatgtgcatgttgccctctggataaattctcaaggaggcagaaagatgaaagct
ggagatactgtatcatatgtcatctgtcaggatgggtcaaacctgagtgcgagtcaaagg
gcctatgcacctgagcagctgcagaaacaggacagtttaaccattgacacccagtactac
ctggcccagcagatccacccagtcgtggctcggatctgtgagcccatagacggaattgat
gctgtcctcattgcaacgtggttaggactcgaccccacccagtttagagtgcatcattgt
cttaaggaggaagagaatgatgatctacgtggtggcctagcccagctcaccgatgaagag
aaatacagggactgtgagagattcaaatgtccatgccctgtgtgtggaactgagaatatt
tacgatagtgtcttcgagggttcgggaaccgatatggagctcagcttgtatcgttgcagt
aacatcaactgtaacgcttcacctatgaactttctggtacagctgaacaacaaattgatc
ttggacattagacgttgcattaaaaaatactatgaaggctggttgatttgtgaggagcca
acatgtcgaaatcgaactcggcgccttccccttcagttctcccgaaatggacctctttgc
caagtctgcatgaaagctacacttcgaccagagtattctgacaagtccctgtacacccag
ctgtgcttttaccggtacatttttgatgtggactgtgcaatggagaaacttattaccgat
catgagaaagataaatcgaggaagcctgttcttacccccaaagttcgtgatgactacaga
aatctcaagaacacagtagagcatttcttgtcccaaagtgggtacactgaagtgaacctc
agcaaactcttcgcagattgtgccgtgaggtcctga
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integrated database retrieval system
