Rhinolophus ferrumequinum (greater horseshoe bat): 117029165
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Entry
117029165 CDS
T07722
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04082
Neuroactive ligand signaling
rfq04721
Synaptic vesicle cycle
rfq04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117029165 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
117029165 (SLC6A12)
04721 Synaptic vesicle cycle
117029165 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfq02000
]
117029165 (SLC6A12)
Transporters [BR:
rfq02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117029165 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117029165
NCBI-ProteinID:
XP_032974109
Ensembl:
ENSRFEG00010020374
UniProt:
A0A671FYS8
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Position
10:complement(88273967..88304405)
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AA seq
611 aa
AA seq
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MAMDRKMAVPEDGPPVVSWVPEEGEKLDQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFP
YLCYKNGGGAFFIPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGLASV
VIESYLNIYYIIILAWALFYLFSSFTSQLPWITCTNTWNTEHCKDFLNHSGVNTVTPSEN
FTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWVICYFCIWKGVKTTGKVVYFTA
TFPYLMLVILLIRGITLPGAYEGIIYYLKPDLSRLKDPQVWMDAGTQIFFSFAICQGCLT
ALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLA
FIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPRQLRKSGRREL
LILVIAVTCYLIGLFLVTEGGMYIFQLFDYYACSGICLLFLAMFEVICVSWVYGADRFYD
NVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLTKYTPLKYNNIYVYPAWGYSIGWFLA
LSSMVCVPLFIVVTLLKTQGSFKKRLRQLITPDPRLPQPKQHLCLHGGTSQDGEPSPVKE
GLTTGKKETHL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctatggacagaaaaatggcagtccctgaggatgggcctcccgtggtctcctgggtc
cctgaggagggagagaagttggaccaggtgaaggatcggggccaatggaccaacaagatg
gagtttgtgctgtcagtggccggggagatcattgggctgggcaatgtctggaggtttccc
tatctctgctacaaaaacggaggtggagctttcttcatcccctacttcattttcttcttc
acctgcggcatccctgtgttcttcctggaggtggcgttgggccagtacaccagccaagga
agcgtcacagcctggagaaagatctgccctctcctccagggcattggtctggcgtctgtg
gtcattgagtcctatttgaacatctactacatcatcatcctcgcctgggccctcttctat
ctgttcagctcctttacctctcagctgccctggataacctgtaccaatacctggaacaca
gagcactgcaaggactttctgaaccactcgggagtcaacacagtgacgccctctgagaac
ttcacgtcacctgtcatggaattctgggagagacgtgttctgggcattacctcaggtatc
cacgacctgggggccctgcgctgggagctggccctgtgcctcctgcttgcctgggtcatc
tgctacttctgcatctggaagggggtcaagaccacgggcaaggtggtttatttcacagcc
acgttcccctacctgatgctggtcatcctattgatccgaggcatcacgcttcccggagcc
tatgagggcatcatctattacctgaagccagatttgtctcgtctgaaggatccccaggtg
tggatggatgcgggcacgcagatcttcttctccttcgccatctgccaggggtgcctgacg
gccctgggcagctacaacaagtaccacaacaactgctacaaggactgcattgccctctgc
ttcctgaacagtgccaccagctttgtggccggctttgtggtcttctccatcctgggcttc
atgtctcaagaacagggggtgcccatctctgaagtggccgaatcaggtcctggtctggcc
ttcattgcattccccaaggctgtgacaatgatgcccttatcccagctgtggtcctgcctt
ttcttcatcatgctcatcttcctagggctggacagccagtttgtctgtgtggagtgcctg
gtgacggcctccgtggacatgttccctcggcagctccggaagagtgggcggcgagagctc
ctcatcctcgtcatcgccgtcacgtgttacctgatagggctcttcctggtcaccgagggc
ggaatgtatatcttccagctgtttgattattacgcctgcagcggcatatgcctgctcttc
ctcgcaatgtttgaagtgatctgcgtcagctgggtgtatggggcagaccgtttctatgac
aacgttgaggacatgattggctaccggccgtggcccctggtgaagatctcctggctcttc
ctgacccctgggctttgcctggccactttcttcttctccttgaccaagtacacacctctc
aaatacaacaacatctatgtgtaccctgcctggggatactccatcggctggttcctggct
ctctcctccatggtctgcgtcccactctttatcgtcgtcaccctcctgaagacccagggt
tccttcaagaagcgcctgagacagctcatcacccctgaccccagactgccacagcccaag
caacacctatgtctgcatggaggcaccagccaggacggtgagccctccccagtgaaggag
ggactgacaactgggaagaaagagacccacttatag
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