Rhinolophus ferrumequinum (greater horseshoe bat): 117029860
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Entry
117029860 CDS
T07722
Name
(RefSeq) AP-5 complex subunit beta-1-like isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117029860
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117029860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
117029860
NCBI-ProteinID:
XP_032975005
Ensembl:
ENSRFEG00010003472
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Position
11:6021841..6044988
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AA seq
975 aa
AA seq
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MRGAFSNPTRPVPSASLTKGGAVPPFPGRAGGSRGEEAGQRRSRQSVPAFLRETVPGTAR
APFPTPLSCRRPPSERGPLQPGAPGEREAGPARLTMGPLSRETWAQRLGAFRASPSAFMA
GPEGEDLGRDLLSDLRSEKLSEQTKVSLLALSLEYPAELWPDTPAAEAAVTSLLDTLDLL
PPRSSALRRPLLLAATTALVAGGALGPTSGASLRLLPLLLGLASGRALGQGIGPSSEQRP
LQATACECLRELESCKPGLLGGYLGLLRGLLGQGGPVGPVQPLSLLLALALRNTLAIQAR
ARASLQGLLTARVSPTGGGPWNWTLAEEGDAHLQPQVSPWLASEEEECGLSALEPSPEEA
LELRAAVAQLLDTSYLLTPVAQAQLLWQLGWALRGLRGQLPVLFKPQLVRLLGTAQLTLL
HAVLALKAAFGEALFTAQDEALLLHRLILAAQHPALPLPAHLFYLHCLLSFPENCPLGPT
GEEALPLLLEPQLCCGLLPSLLLDPMALLARLHLLCLLCAEDEEKEEKGQGQSPRRYLEE
LLASLWQRAALHGGPRALATLCFQASYLVAHCLAGQPTVLRPLIRGLAHLYRARPVLAPH
FVDLLDQVGSELGEPLRVVLQQEVVSRPGGDEALGWHLQMLAKVADRDAQSATLSFLQAA
AVHCTNWGLQQALLQVCRALLRAGVGGGLADLLQALARQLEDPDGRDHARLYYILLSHLS
APKLGVALGPSLVVPALASSLVAENQGFAATLMVQEAPAPIQLSVGARRAEGPVPVLQLQ
VEVLEPVYSLELRFRVEGQLYAPLGAVHVPCLCPGRPARPLLLPLQPRRPAPTQLDIRAL
YTTTTGLTCYAHLPPLPVNFADLFLPFPQPPEGATLGFFEELWESCLPKGTESRLWCPLG
PQGLEDLVSRHLEPFVVVAQPPTSYHIAIRLPPDSRLLLRLEKAQAEGVPVVLRTDDWSV
LPLVGDYLRGLATAV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggggcattttcgaatcctactcgcccggtaccgtctgcttccttaaccaaaggt
ggcgccgtcccacctttcccgggccgggctggaggcagccggggggaggaggcaggtcag
agaaggagtcgccaaagcgtccccgctttcctccgagagaccgtgcccgggacggcgcgc
gcaccctttccaactccgctgagctgtcgccgtcctccctccgaacgaggtcccctgcag
ccaggtgcaccgggcgagagggaagcgggacctgcgcgcctgaccatggggcccttgagc
cgggaaacctgggcccagcgcctgggcgccttccgggccagcccgtccgccttcatggca
ggtcctgagggtgaggatctgggtcgtgacctgctgagcgacctgaggagtgagaagctg
agcgagcagaccaaggtttccttgctggccctgagcttggagtacccagccgagctgtgg
cctgatacccctgcagctgaggcagccgtcacctccctgttggacactctggaccttcta
cccccacggtcctcagctctgcggcggcccctgttgctggcggctaccacagccttggtg
gcaggaggtgcactgggccccacctctggagcctctctccggctcctgcccctactcctt
ggcttggcttctggccgcgctctggggcaaggtattggcccctcctcggaacagcgcccc
ctgcaggccacggcgtgcgagtgcctgcgggagctggagagctgcaaacctgggctgctg
gggggttacctggggctgctacggggtctgctggggcaggggggccccgtgggccctgtc
cagccactcagcctgctgctggcacttgcccttcgcaacaccttggcgatacaggctagg
gccagggctagcctgcagggtctgcttacagccagggtgtctcccactgggggtggcccc
tggaactggacactagctgaagagggcgatgcccaccttcagccccaggtgtccccctgg
ctggcatctgaggaggaggagtgtggcctttcagcgctagagcctagtcctgaggaggcc
ctggagctgcgggctgccgtggcccagcttttggacacctcctatctgctcactcctgtg
gcccaggcccagcttctttggcagctgggctgggccctgcggggtctgcggggacagctc
ccagtgctcttcaagccgcagttggtacggctgctgggcacagcacagctgactctgctg
cacgctgtcctggcactcaaggccgccttcggcgaggcgctgttcacagcccaggacgag
gccttgctgctccacaggctcattttggctgcccagcacccagccctgcccctgcctgcc
catctcttctacctgcactgcctcctgagcttccccgagaactgccctctgggccccaca
ggcgaggaagctctcccactgctgctagagccccagctgtgctgtggcctccttcccagt
ctcctgctcgacccaatggccctcctggcccgcctgcatctgctgtgcctgctgtgtgct
gaagatgaggaaaaggaggagaaaggtcagggtcagagcccccggcgctacttggaggag
ctgctggccagcctgtggcagagggcagccctgcatgggggcccccgggccttggccaca
ctttgcttccaggcctcatacctggttgctcactgcctggctggacaacctacagtgctg
aggcccttgattcgtggactggcccatctgtaccgagcccggcctgtgctggctccccat
tttgtggacctcttggatcaggtgggctctgaactgggggagcccctaagggtggtgttg
cagcaagaggtggtgtccaggccaggtggggatgaggcccttggttggcacctgcagatg
ctggcaaaggtggcagaccgggatgcccagagtgccaccctcagcttcctgcaggctgca
gctgttcactgcacaaactggggcctccagcaggccctgctgcaggtctgccgggccctg
cttcgggcaggtgttgggggaggcctggcagacttgttgcaggccctggccaggcagcta
gaggacccagatggacgggaccatgcccgcctctactatatcctcctgagccatctgtca
gcgcccaagctgggggtggccctgggtccctcacttgttgtacctgcactagcctcttca
ctggtggctgagaatcagggctttgctgcgacactgatggtgcaggaggctccagccccg
attcagctgagtgtgggggcccgcagagccgagggcccggtcccagtgctgcagctccag
gtggaggtgctggagcctgtgtactctctggagctgcgcttccgcgtggaaggacaactc
tatgcacccctgggggctgtccacgtgccctgcctgtgccctggccgccccgcccgccct
ctgctcctgcccctgcagccccgacgcccggcccccacacagctggatatccgcgccctg
tacaccacaaccactggcctcacatgctatgcccacctgccacccctgcctgtgaacttt
gctgacctctttctgcctttccctcagccccctgagggggccacactgggcttctttgag
gagctctgggagtcttgcctgccaaagggcactgagagtcgcttatggtgccctcttggg
ccacagggtctggaggatttggtgtcccgccacctggagccctttgtggtggtggcccag
ccccccactagctaccacatagccattcgcctgccccccgactcgaggctgctgctgagg
ctggagaaagcccaggcagagggagtgccggtggtcctgcggacggatgactggtccgtg
ctccccctggtgggggactacctccgtggtctggcaactgctgtctga
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