Rhinolophus ferrumequinum (greater horseshoe bat): 117029863
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Entry
117029863 CDS
T07722
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117029863 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
117029863 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117029863 (PABPC5)
03041 Spliceosome [BR:
rfq03041
]
117029863 (PABPC5)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117029863 (PABPC5)
mRNA cycle factors
Stress granule specific factors
117029863 (PABPC5)
Spliceosome [BR:
rfq03041
]
Complex C
Other components
Complex C specific factors
117029863 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
117029863
NCBI-ProteinID:
XP_032975056
Ensembl:
ENSRFEG00010004787
UniProt:
A0A671E1L9
LinkDB
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Position
X:complement(62951920..62954981)
Genome browser
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDEMNDEKLKDIFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVMDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIMGSKPLHVTLGQARHRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggggaacctaatcctgctggcaagaaaaagaagtacctcaaggctgccctg
tatgtgggtgacttggacccagatgtcaccgaggacatgctatataaaaagttcaggcct
gctggccctctacgcttcacgcgaatctgtcgtgacccggtgacccgcagccccctgggc
tatggctatgttaacttccgctttcctgcggatgctgagtgggccctgaacaccatgaat
tttgatttgattaatggcaaaccattccgcctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaatctggacaaatccatagacaatagg
gcccttttttatttattttctgcttttgggaacattctctcctgcaaagttgtatgtgat
gacaatggctctaagggttatgcctatgtgcactttgacagcctggcggctgccaataga
gccatctggcacatgaacggagtgcggctcaacaaccgccaggtgtatgttggccgattc
aaatttccggaagagcgggcagctgaagtcagaaccagggatagagcaactttcaccaat
gtttttgttaaaaactttggagatgaaatgaatgatgaaaaactgaaggacattttcagt
gagtatgggccaactgagagtgttaaggtaataagagatgccagtgggaaatctaaaggc
tttggatttgtaagatatgagacacacgaggctgcccaaaaggctgtgatggacctgcat
ggaaagtccatcgatgggaaagtcctatatgtagggagagcacagaagaaaattgaacgt
ctggctgaattaaggcgaagatttgaacggctgagattaaaagaaaaaagtcggcctcca
ggggtgcctatctatattaagaacctggatgagaccatcaatgatgaaaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtggggcaaggc
aaagggtttggtgttgtctgcttctcctcttttgaagaggctaccaaagcagtggatgag
atgaatggtcgcataatgggctccaagcccctgcatgtcaccctgggccaggccaggcac
aggtggtga
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