Rhinolophus ferrumequinum (greater horseshoe bat): 117029867
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Entry
117029867 CDS
T07722
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03420
Nucleotide excision repair
rfq04120
Ubiquitin mediated proteolysis
rfq05161
Hepatitis B
rfq05170
Human immunodeficiency virus 1 infection
rfq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117029867 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
117029867 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117029867 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
117029867 (DDB1)
05161 Hepatitis B
117029867 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117029867 (DDB1)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117029867 (DDB1)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
117029867 (DDB1)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117029867 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117029867 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
117029867
NCBI-ProteinID:
XP_032975020
Ensembl:
ENSRFEG00010001692
UniProt:
A0A671DMQ3
LinkDB
All DBs
Position
11:9564368..9590297
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELQQISHTEMEHEVAC
LDITPLGDSNGQSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgctgattgccaaaaacacgagattagag
atctatgtggtcaccgctgaggggcttcggcccgttaaagaggtgggcatgtacgggaag
atcgctgtcatggagcttttcaggcccaagggggagagcaaggacctcctgtttatcctg
acagctaaatacaatgcctgcatcctggaatacaagcagagtggcgaaagcattgacatc
atcacgcgagcccatggcaacgtccaggaccgaatcggccgcccctcggaaaccggcatt
attggcatcattgaccctgagtgccgtatgattggcctgcgactctatgatgggcttttc
aaggttattccactcgaccgggacaataaagagctcaaggcctttaacatccgcctggag
gagttgcatgtcattgacgtcaagttcctgtatggttgccaagcacctactatatgtttc
gtctaccaggaccctcaggggcggcacgtaaaaacttacgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatc
gcagtcccggagccttttggaggggccatcatcattgggcaggaatcaatcacctatcac
aatggtgacaaatacctggccattgcaccgcctatcatcaagcaaagcaccattgtgtgt
cacaatcgcgtggaccccaatggttcccgttatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggaacagatggatggcaccgtcactcttaaggatctc
cgtgtggaactcctcggagagacctccattgctgaatgcttgacatacctcgataatggc
gttgtatttgttgggtctcgccttggtgactctcagcttgtgaagctcaatgtcgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccatcgtg
gacatgtgtgtggtggacctggagaggcaggggcagggacagctggtcacttgctctggg
gctttcaaggaaggttccctgcggatcatccggaatggaattggaatccacgagcatgcc
agcattgacttaccaggcatcaaaggcctgtggccattgcggtctgatcctaaccgggag
actgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaagaggtggaagaaactgaactgatgggtttcgtggatgatcagcagacttttttctgt
ggcaacgtggctcatcagcaacttatccagatcacttctgcatccgtgaggttggtctct
caagaacccaaagctctagtcagtgaatggaaggagccccagggcaagaacatcagtgtg
gcctcctgcaacagcagccaggtagtcgtcgccgtgggaagggccctctactacctgcag
atccatcctcaggagctccaacagatcagccacacagagatggaacacgaagtggcctgc
ttggacatcacccccttaggggacagcaatgggcagtcccctctttgtgccattggcctc
tggacagacatctcggcccgtatcttgaagctgccctcttttgaactgctgcacaaagag
atgctgggtggagagatcatccctcgttccatcctgatgaccacctttgagagtagccac
tacctcctttgtgccttgggagatggagcacttttctactttgggctcaatattgagaca
ggcctgttgagcgatcggaagaaggtgactctgggcacccaacctacggtgttgaggacc
ttccgctcgctctccaccaccaacgtcttcgcttgctccgaccgccccactgtcatctac
agcagcaaccacaaactggtcttctccaatgtcaacctcaaggaggtgaactacatgtgt
cccctcaactcagatggctatccggacagcctggcactggccaacaacagcaccctcacc
atcggcaccatcgacgagatccagaagctgcacattcgcacggttcccctctacgagtct
cccaggaagatctgctaccaggaagtgtcccagtgctttggggtcctctccagccgcatt
gaagttcaggacacaagtgggggcacaactgctttgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcacgagacg
tccttcggagaagaggtggaggtgcacaacctccttatcattgaccagcacaccttcgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcattgtgggcacggccatggtgtacccggaagag
gcggagcccaagcagggccggattgtggtctttcagtattcggatggaaaactacagact
gtggctgaaaaggaagtgaaaggggccgtgtactctatggtggaatttaacgggaagctg
ttggccagcatcaatagcacggtgcggctttatgagtggacgacagagaaggagcttcgc
accgagtgtaatcactacaacaacatcatggcactctacctgaagaccaagggtgacttc
atcctggtgggcgacctcatgcgctccgtgctgctgctcgcctacaagcccatggaggga
aacttcgaagagatcgctcgagactttaaccccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agtgctgccaccactgatgaggagcgacaacaccttcaggaggtgggtctcttccacctg
ggcgaattcgtcaatgtcttctgccacggctccctggttatgcagaatctgggcgagact
tccacccccacgcagggctcagtgctcttcggcaccgttaatggcatgattgggctggtg
acctcactgtcagagagctggtacaacctcctgttggatatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgagcactccttttggagatcctttcatacggagcga
aagacagaaccagccaccggcttcatcgacggggacttgattgagagcttcctggatatt
agccggcccaagatgcaggaggttgtggcaaacctacagtatgatgatggcagcgggatg
aagcgagaggccaccgcggacgacctcatcaaggttgtggaggagctgacgcggatccac
tag
DBGET
integrated database retrieval system
