Rhinolophus ferrumequinum (greater horseshoe bat): 117030074
Help
Entry
117030074 CDS
T07722
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
117030074 (SHANK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_4
Ank_3
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117030074
NCBI-ProteinID:
XP_032975626
Ensembl:
ENSRFEG00010019833
LinkDB
All DBs
Position
11:2464385..2935412
Genome browser
AA seq
1858 aa
AA seq
DB search
MPSRPRAAMPRSPTSSEDEMAQSFSDYSMGSESDSSKEETIYDTIRATAEKPGSARTEDS
QGDTLVIRIVIQDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASNGRD
GKFLDEERLLREYPQPVGKGVPSLEFRYKKRVYKQSNLDEKQLAKLHSKTNLKKCMDYVQ
HRSVEKIVKMLERGLDPNFHDLETGETPLTLAAQLDDPVEVIKALRNGGAHLDFRARDGM
TALHKAARTRNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEHATVC
CKDENGWHEIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLF
RGGNKELKNYNSQTPFQVAIIAGNFELAEYIKSHKETDIVPFREAPAYSNRRRRPPSTLA
APRVLLRSNSDNNLNASVPDWAVCAAASHRSLSPQLLQQAPGKADGALRTIGSYVPGPCS
RSPSLNRLGGAGDDGKRPQQPWHVGPTFPPGANKDTLSAFEYPGPKRKLYSAVPGRLFVV
VKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKDSQAE
TRADRSKKLFRHYTVGXYDSFDASSDCIIQDKTVVLQKRDNEGFGFVLRGAKADTPIEEF
TPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLV
LKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPE
EIVPAPKPSRTAENMAMESRVATIKQRPTSRCFPPVSDMNSVYERQGIAVMTPTVPGSPK
GPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQS
VPPSPPPPSPTAYNCPKSPTPRVYGTIKPTFTQNPAAKVSAAARSDTVATMMREKGMYYR
RELDRYSLDSDDLYSRAPTAPANVRSRRGQMPENPYSEVGKIASKAVYVPAKPARRKGVL
VKQSNVEDSPEKTCSIAIPTIIVKEPSTSSSGKSSQGSSVETDPQAPEPPGQLRPDDGLT
VSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRMRPSKFTEEGGFG
EEEGTEQLSSPTTPGAPPREPESHFVGGGDAGAQGDAGRPPNSTSKAKGPESSPAVPPKS
GGVAGPENYVHPLTGRPLDPSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYIDTK
MRPSVEAGFLTGTRQNTRGPLRRQETENKYESDLGKDRKGDDKKNMLINIVDTSQQKSAG
LLMVHTVDAAKPEDFLEEEDEKADVEMKPDNSPPEVPESVPKTEGALQISAGPEPATTAA
GRTMVTAGSMEEAVILPFRIPPPPLASVDLDEDFVFTEPLPPPLEFANSFDIPDDRLASV
PALTDLVKQKKNDASPSPSLNSSQPTNSADSKKPAGLSNCLPASFLPPPESFDTVTDSGI
EEVDSRSSSDHHLETTSTISTVSSISTLSSEGGETVDTCTVYADGQALLADKPPVPPKPK
VKPLIPKSDALHQDALVEEDVDSFVIPPPAPPPPPGSAQPLTVKGIQPRTSKLWGDVPEV
KSPILSGPKANVISELNSILQQMNREKSAKPGEGLDSPTGTRPAGLAPRSPEVLSTVSGT
RSTTVTFTVRPGTSQPITLQSRPPDYDSRTSGTRHAPSPVVSPTEMSKEILPGPLCAAVA
SPAPSLSDVFSLPSQPPSGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDV
ADWLESLNLGEHKETFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacgacccagggccgccatgccgcgcagccccacatccagcgaggacgagatg
gcccagagcttctctgactactccatgggctcggagtccgacagctccaaggaagagacc
atttacgacacgatccgggccaccgcggagaagcccggcagtgccaggacggaggacagc
caaggcgacacgctggtcattcgtattgtcattcaggacctgcagcagacgaagtgtatc
cgatttaacccggacgccacggtgtgggtggcgaagcagcggattctgtgttcgttgaac
cagagcctgaaggacgtcctgaattacgggctattccagccagcgagcaacgggcgcgac
gggaagttcttggacgaggagcggctgctgcgcgagtacccgcagcccgtgggcaagggc
gtcccctcgctggagttccgatacaagaagcgggtgtacaaacaatccaatctggacgag
aagcagctggccaaactacatagcaagaccaatctgaaaaaatgcatggattacgttcag
catcgctcagtggagaaaatcgtgaagatgctggagcgagggctggacccgaattttcat
gacctggagactggagagaccccactgaccttggccgctcagctggacgaccccgtggag
gtgatcaaagcgctcagaaatggcggggcccacctggatttccgcgccagggacgggatg
acggccctgcacaaagctgcccgaaccaggaaccaggtggccctgaagacccttttggag
cttggagcctccccagattataaagacagctacggcctcacacccctgtaccacactgcc
atcgtcgggggcgacccttactgctgtgaactgctgctccatgagcatgccaccgtgtgc
tgcaaggacgagaacggctggcatgagatccaccaggcctgcaggtacggacacgtgcag
cacctggagcacctgctgttctacggggccgacatgggggcccagaacgcctcggggaac
accgccctgcacatctgcgccctctacaaccaggacagctgtgcaagagtgctgctgttt
cgaggcggaaataaggagctgaagaactacaacagccagacgccgtttcaggtggccatc
atagcgggcaactttgagctggcagagtacatcaagagccacaaggagacggacattgtg
cccttccgagaggccccggcctactccaaccgcaggcggcggccccccagcacgctggcc
gccccccgggtcctgctgcgctccaacagcgacaacaacctcaacgccagcgtgcccgac
tgggccgtctgcgctgccgcctcccaccgcagcctctcgccccagctgctgcagcaggcg
cccggcaaggccgacggggccctgaggaccatcggcagctacgtccccgggccctgcagc
cggtccccatcgctcaacaggctcggcggtgctggcgacgatggcaagcggccccagcag
ccctggcatgtggggccaaccttcccgcctggtgccaacaaggacacactctccgccttc
gagtacccggggcccaagcggaagctgtacagtgcggtgcccgggaggctgttcgtcgtc
gtcaagccataccaaccccaggtcgatggcgagatcccccttcaccgtggcgacagggtc
aaagttctgagcatcggcgaagggggcttctgggaaggcagcgcccgtggtcacatcgga
tggttcccggccgagtgcgtggaggaagtccagtgcaagcccaaggacagccaggcagag
acgcgggcagaccgcagcaagaagctcttcaggcactacacggtcggcntgtacgacagc
ttcgatgcttccagtgactgcatcatccaagacaagacggtggtcctgcagaaaagggac
aatgagggcttcgggtttgtcctgcgaggggcgaaagcggacacacccattgaggagttc
acgccgacgccggcgttcccggccctgcagtacttggagtccgtggatgaaggcggggtg
gcatggcaagccggactgaggactggggacttcttgatcgaggtgaacagtgagaacgtc
gtgaaggtgggccaccggcaggtggtgaacatgatccgtcagggagggaatcacctcgtc
ctcaaggtggtcacagtgaccaggaatctcgacccagatgacaccgccaggaagaaagct
cctcctccccctaagcgtgccccgaccacggcgctcacgctgcgctccaagtccatgacg
tcggagctggaggagctcgtggataaagcctccgtccggaagaagaaggataagcccgag
gagatcgtccccgcccccaagccatcccgcacagcagagaacatggccatggagtccagg
gtggccaccatcaagcagcggcccaccagccggtgctttccacccgtctcggacatgaac
tccgtgtatgaacgccaggggatcgctgtgatgacgcccaccgttcccgggagcccgaaa
ggcccatttctgggcctccctcgaggtacgatgcgaaggcagaaatcaatagacagcaga
atctttctatcaggaatcacggaggaagagcggcagttcctggcccctccgatgctgaag
ttcaccagaagcctgtccatgccggacacctccgaggacatcccgccccccccgcagtct
gtgcccccgtccccaccaccgccctcccccactgcctacaactgccccaagtccccgact
ccgcgagtctacgggacgattaagcccacgttcactcagaaccccgccgccaaggtgtcc
gccgcggctcgctctgacacggtggccactatgatgagagagaaggggatgtactaccgc
agggagctggaccgctactcgctggattccgacgacctgtacagccgcgcccccacggcc
ccggccaacgtccgcagcaggcggggccagatgcccgaaaacccgtactcggaggtgggc
aagatcgcgagcaaggccgtgtatgtgcccgccaagcccgcgcggcggaagggcgtgctg
gtgaagcagtccaacgtggaggacagccccgagaagacgtgctccatcgccatccccacc
atcatcgtcaaggagccctccaccagcagcagcggcaagagcagccagggcagcagcgtg
gagaccgacccgcaggccccggagccgccgggccagctgcggcccgacgacggcctcacc
gtcagcagccccttcgccgccgccatcgccggggccgtgcgcgaccgagagaagcggctt
gaagccaggaggaactcgccggccttcctctccacagacctgggcgacgaggacgtgggt
ctggggccgcctgccccccgaatgcggccctccaagttcaccgaggagggcggcttcggc
gaggaggagggcaccgagcagctgtcgtcgcccacgacacccggggcgccgcccagggag
cccgagagccattttgtgggtggtggcgatgccggagctcagggtgatgccggcaggcca
ccaaattccacgtccaaagccaaggggcccgagagcagccctgcagtgcccccaaagagc
ggcggcgtggctggccccgagaactacgtccacccactcacagggaggccgctggacccc
agctccccgctggccctggcactttccgcgagggaccgagccatgaaggagtcccagcag
ggccccaagggggaggcccccaaggccgacctcaacaaacctctgtacatcgataccaaa
atgcggcccagcgtggaggccggcttccttacgggcacgaggcagaacacacgggggccc
ctgaggcggcaagagaccgagaacaagtacgagagcgacctgggcaaggaccggaagggc
gatgacaagaagaacatgttgatcaacatcgtggacacgtcccagcagaagtcggccggt
ctgctgatggttcacactgtggacgccgccaagccggaagacttcctggaggaagaggat
gagaaagcagatgtggaaatgaagccggacaactcgccgcctgaggtgccagaaagtgtt
cccaaaaccgaaggtgctttacagatctccgccggccccgagcccgccaccaccgccgcc
ggcaggaccatggtgacggcgggctccatggaggaggcggtgatcttgccattccgcatc
cctcccccacctctggcctccgtggacctggatgaggattttgtttttacagagccattg
cctcctcccctggagttcgcaaacagttttgatatccctgacgaccgccttgcttccgtc
cctgctctcacagacttggtcaagcagaaaaaaaatgatgcctccccgtccccttcgttg
aactccagccaacccaccaactctgcagacagcaagaagccggctggcctttccaactgt
ctgcccgcctcattcctgccaccgcccgaaagctttgacaccgtcacggactccgggatc
gaggaggtggacagccggagcagcagcgaccaccacctggagaccaccagcaccatctcc
acggtgtccagcatctccacgctgtcctccgaaggcggggagactgtggatacctgcacc
gtctatgcagatggacaggccctgctggctgacaagccccctgtccctcccaagccgaag
gtgaagcctctcatccccaagagcgatgcacttcaccaggacgcgctcgtggaggaggac
gtggatagctttgtcatccccccacccgcacccccaccgccgcctggcagtgcccagccc
ctgaccgtgaaggggatccagccaaggacctccaagttgtggggtgacgtcccagaggtc
aagagccccattctctcaggcccaaaagcaaacgtgatcagcgaattgaactcgatcctg
cagcaaatgaaccgagagaaatcggccaagccgggggaaggactagactcgccgacgggg
accaggccggctggcctcgctccaagaagcccagaggtcctgagcaccgtctcaggtaca
cggagcacgacggttaccttcaccgttcgccctgggacctcccagcccatcaccctgcag
agccggccccctgactatgacagtaggacctcaggaacaagacatgccccaagccctgtg
gtctcgccaacagagatgagcaaagagattctgcctgggcccctgtgtgctgccgtcgca
tctcctgccccctctctctccgatgtcttcagccttccgagccagcccccttccggggac
ctgtttggcttgaacccagcgggacgcagcaggtcaccatctccctcgatactgcaacag
ccaatctcaaataagccttttacaactaaacctgtccacctgtggactaaaccagacgtg
gcggattggctggaaagtctaaacttgggtgaacataaggagaccttcatggacaatgag
atcgatggcagtcacttaccaaacctgcagaaggaagacctaatagatctcggggtgact
cgagttggacacagaatgaacatagaaagggctttgaaacagctgctggacagataa
DBGET
integrated database retrieval system
