Rhinolophus ferrumequinum (greater horseshoe bat): 117030084
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Entry
117030084 CDS
T07722
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03013
Nucleocytoplasmic transport
rfq05014
Amyotrophic lateral sclerosis
rfq05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117030084 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
117030084 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117030084 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117030084 (NUP98)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117030084 (NUP98)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117030084 (NUP98)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117030084 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
117030084
NCBI-ProteinID:
XP_032975638
Ensembl:
ENSRFEG00010015605
UniProt:
A0A671FD06
LinkDB
All DBs
Position
11:47380782..47474019
Genome browser
AA seq
1817 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGNTNTTSNPFGSTSGSLFGPSSFTATPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTSSLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTGFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFAQPITTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
TSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPGPGTLGTGLSAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLSNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKHNSSSSVDDTIVALNMRAALRNGLEGSSDETSFHEESLQDDRE
EIENNTYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGE
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTS
TKKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPILD
SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSRLPCKV
DTSQEICSPRLPISAAHSSKSRSLVGGLLQSKLTSGAFFSPSASVQECRSPRTSSLMNIP
STSPWSVPPPLTSVFAVPSPAAEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDIALFMG
RSFRVGWGPNWILAHSGEQLSASHELENHQITDSVEYGFLPNPVAVKSLTESPFKVHLEK
LSLRQKKLDEDLQLYQIPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKEASGDL
LEAQIVKHWSLTWTLCEALWGHLKELDSPLDESSEYIQILERRRAFSRWLSHTAAPQIEE
EVSLTRKDNPVEAVFSYLTGKRISEACCLAQQSGDHRLALLLSQLVGSQSVRELLTMQLV
DWHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTA
SISRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGCVVEEEQDSRRPLQDVCFHLLKLYS
DRHYDLNQLLEPRSITVDPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEG
LWEWAIFVFLHIDNSSMREKAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEWIHEAK
AVRAHMESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERS
SLIQDWETSGLVYLDYIQVLEMLHHIQQVDCSGYELERLHTKVTSLCNRIEQIQCYNAKD
RLAQSDMAKRVANLLRVVLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEE
LRSLTQSYLQELTVGSQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagaatactggctttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggtctgtttggaaattcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacctccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtactagcagtgggggactttttggaaacacaaataccacctctaatcctttt
ggtagcacatctggctctctctttgggccaagtagttttacagctactcctactgggact
actattaaatttaatcctccaactggtacagatactatggttaaagctggagttagtact
aacatcagtactaagcaccaatgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaggcaaaccggaaaggcccgcagaaccaggtggga
gcaggtaccacgagtagcttgtttgggtcttctccggccacttccagtgcgacaggactc
ttcagctcctccaccactaattcaggctttgcatatggtcagaacaaaacaggctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccaacagaatcagcaa
acgaccagcctcttcagcaaaccatttgcccagcccataaccacccagaacactggcttt
tcctttggtaataccagcacactaggacagccgagcaccaacaccatgggtttatttgga
gtaacccaagcttcacagcctggcggtctttttgggacagctacaaacaccagtactggg
acagcatttggaacaggaacaggtctctttgggcagaccaatactggatttggtgctgtt
acttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggtttcggcacaaataccagtgggaatagtattttt
ggaagtaaaccaggacctgggactctgggaactgggcttagtgcaggatttggaacagct
cttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcggagggcctctt
ggtacaggagcctttggggcccctggatttaataccacgacagccactttgggctttgga
gccccccaggccccagtagctttgacagatccaaacgcctccgctgctcagcaggctgtt
ctccaacagcacatcaacagtctaacatactcaccttttggagactctcctctctttcgg
aatcccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatccagcagcg
cagaaggctctcactacacccactcattataaattgacaccccgccctgccactagagtt
cgaccaaaggctttacaaacgacaggcacagccaagtcacatctctttgatggactggat
gatgatgaaccatccttagccaatggagcgtttatgcccaagaagagcattaagaagttg
gttttgaaaaaccttagcaatagcaatctcttctctccggttaaccgtgattcagaagat
ctagcttcaccatctgattatccagaaaatggagagagattcagtttcctgagcaaacct
gttgatgagaatcatcagcaggatggagatgatgattctcttgtgtcacgtttttatact
aaccctattgccaaacccattcctcaaaccccagagagtgctggcaataaacacaacagc
agcagcagtgtggatgataccattgttgcgttaaacatgcgtgctgccttgcgaaatgga
ctggaaggaagcagtgacgagacctcttttcatgaggagtcactgcaggatgaccgagaa
gaaatagaaaataatacttaccatatgcatccagcaggcattgttctcactaaggttggt
tattatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagagtgc
attgtctcggacttcactattggtcgtaaaggttatggttcaatctattttgaaggagag
gtgaatttgacaaatctaaatttggatgacattgtgcatatccgaaggaaagaagttatt
gtctatttagatgataaccaaaaaccacctgtgggtgaaggactaaataggaaggctgaa
gttacattggacggagtttggccaacagataaaacatctcgttgtttaataaagagccca
gatcgacttgctgatatcaactatgagggaagattagaagcagtttcgaggaaacagggt
gctcagttcaaagagtaccgtcctgaaacaggttcttgggtgtttaaggtatctcatttt
tctaagtatggccttcaagattctgatgaagaagaggaggaacgaccatccaaaaccagt
acgaagaagttgaagactgcgcctttgcctcctgcaggccaggccacccctttccagatg
gctcttaatggcaaaccagcacctccaccccagagccagagtccagaggtggagcagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccaattttggat
tccatgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcttcaacacacatt
gcatcttctctgggaattaatccacatgtcttacagatcatgaaagcatcattgcttgct
gatgaagaagatgtagatatggtcctggatcaacgcttcagccgccttccttgtaaagta
gatacttctcaagaaatctgttctcccagactccccatttcagcagcccactcatcaaaa
tcccgttcgttagttggtgggttactacaatcaaaacttacaagtggagcttttttctca
ccaagtgcctctgtgcaagaatgtcgctctcccagaacatcgtctttgatgaatatcccg
tccacatccccttggtctgtccctccacccctgacctctgtgtttgcagtacccagccca
gccgctgaggttcagttgaaaacagtgggtacacgcagacaaccaggcctagtccctctt
gaaaagtctgtcacctatggcaaggggaaactcttgatggacatagccctatttatggga
cgctcatttcgggttggttggggccccaactggattcttgctcatagtggagaacagctg
agtgcctctcatgaactggaaaatcatcagattactgattctgtggaatatggattcctg
cctaatccagtggctgttaaatccctaactgaatccccattcaaagttcatttggaaaaa
ctcagtttgagacaaaagaagctggatgaagacctgcaattataccagatacctctggag
ctcaaattaaaacatagcactgtccacgtggatgagctgtgtcctctcattgttcccaat
ccaggagttgctgtcattcatgactatgcagattgggttaaggaagcatcaggagattta
ttggaagcacaaattgtgaagcactggagcctaacatggacattatgtgaagctctatgg
ggccatctgaaggagcttgacagcccactggatgaatctagtgaatacattcagattctg
gagcgaagaagagctttctctcgctggctatcccatactgccgcacctcagattgaggaa
gaagtctccttaacccgaaaagacaaccctgtggaggctgtcttcagctacctcacaggc
aagaggatcagtgaggcctgctgtctggcccagcagtcaggtgatcatcgtcttgccctt
cttttatcccagttggtgggtagccagtcggttcgggagctgcttacgatgcagctggta
gattggcatcagctccaggctgactgcttcatccaagacgagagactgcgcatctttgct
ctgttggctggcaaaccggtatggcagctctcagagcagaagcaaatcaatgtatgctcc
cagttggactggaaacgctctctggctgtccatctttggtatttgcttccaccaacagcc
tccatttccagggcactcagcatgtatgaagaagcatttcagaatacctctgagggtgac
agatatgcctgctccccacttccttcatacctggagggctctggctgtgtggtagaagag
gagcaagactcacggagaccacttcaagacgtctgctttcatcttctaaaactctacagt
gacagacattatgatctcaaccagctgctagagcctcgaagcataacagtggatcctttg
gactaccgtctaagctggcacttgtgggaggtgctgcgggctcttaactacacccatctc
tcagagcagtgtgagggtgtgctgcaggccagttacgctggccaactggaaagtgagggg
ctttgggagtgggccatctttgtcttcctgcacattgacaattcaagcatgcgtgagaag
gctgttcgagagctgcttacccggcactgccaactattggagacgcctgaatcttgggct
aaggagactttcctgacccagaagctttgtgtgcctgctgaatggattcatgaggccaaa
gcagtgcgagcacacatggaatccgacaagcatctggaggccctctatttatttaaagcc
ggccactggaaccgctgccacaaactcgtcatccggcacttagcttctgatgccatcatt
aatgagaactatgactacctgaaggggttcttggaagacctggcacctcctgagcgcagc
agcctaatccaggactgggaaacatcaggccttgtttacctggactatattcaggtcctt
gaaatgctccaccatatacaacaggtggattgctcaggttatgagctggagcggttacat
accaaagtgacctcactgtgcaaccggatcgagcagatccagtgttacaatgccaaggat
cgcctggctcagtcagacatggccaaacgtgtagccaacctgctgcgtgtggtactgagc
cttcagcatgcccctgatgcaacctctgactcaacgccagaccctcagcgagtccctctg
cgcctgctggctccccacattggccggctccccatgcctgaggactatgccttggaagaa
ctgcgcagcctcacacagtcctaccttcaagaactgactgttgggagccagtaa
DBGET
integrated database retrieval system
