Rhinolophus ferrumequinum (greater horseshoe bat): 117030273
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Entry
117030273 CDS
T07722
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
117030273 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rfq04515
]
117030273 (DCHS1)
Cell adhesion molecules [BR:
rfq04515
]
Cadherins
Cadherin related
117030273 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117030273
NCBI-ProteinID:
XP_032976152
Ensembl:
ENSRFEG00010004414
UniProt:
A0A671E4C7
LinkDB
All DBs
Position
11:45182774..45216447
Genome browser
AA seq
3297 aa
AA seq
DB search
MQKEAGTAPSCTGMQSPRPLHLLPLLLLLLLLGARVPGACGQAGSLDLQIDEEQPAGTLI
GDISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVT
PDGATVEVTVRVADINDHAPAFPRARATLQIPEHTAVGTRYPLEPARDADAGRLGTQGYA
LSGDGAGEIFRLETRPGPDGAPVPELVVTGELDRENHSHYMLQLEAYDGGSPPRRAQALL
DVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEG
DGPFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPS
MTVIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVI
YLVCVARQLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEP
LPEVALPGSFVVRVMARDPDQGTNGQVTYSLAPGTHTRWFSIDPTSGIITTAASLDYELE
PQPQVIVVATDGGLPPLTSSATVSVALQDVNDNEPQFQRTFYNASLPEGIQPGTCFLQVT
ATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVD
GGGLKSMVYVKVFVSDENDNPPQFYPREYAASVSTQSPPGTAVLRVRAHDPDQGPHGRLS
YHILAGNSPPLFALDERSGLLTVAWPLARQANSVVQLEIGAQDGGGLQAEPSARVNISIV
PGTPIPPIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRVGPVALALSGGDPRGLFSLDG
ASGLLQTLRPLDRELLGPVLELEVRAGSGVPPAFTVARVRVLLDDVNDNSPAFPAPEDTV
LLPPSTAPGTLIYTLRALDPDSGINSRVTFNLRAGGGGVFTVDPTTGHVRLMGPLGPSGG
PAHELDLEAQDGGSPPRTSHFRLRVVVQDLGTRGLAPHFESPTYRVDLPSGTTTGTQVLQ
VQARAPDGGPVTYHLAADGPSIPFGLEPQSGWLWVRAALDREAQELYTLKVMAVSGSKAE
LGQQTGTAIVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLT
YSLRQLSEDSKAFHIHPQTGEVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTMHIAV
LDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYMLTGPGS
ELFSLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRTSSLQLLVQVLPSARSPEPP
PDPSEPDPAAPVPVVLTVTAAEGLQPGSLLGSVAPPEPAGMSALTYTLVGGADPDGTFAL
DATSGRLYLARPLDFEAGPAWRALTVRAEGPGGTGARLLRVQVRIQDENEHAPVFARDPL
ALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEPPAPALRLDARTGALSAPRGL
DRETTPALLLLVEATDRPANASRRRAARVSARVFVTDENDNAPVFASPSHVRLPEDQPPG
PAALHVVARDPDLGEAARVTYRLAAGGDGYFRLHSSTGALSLVRPLDREQRAEHVLTVVA
SDHGSPQRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQATDPDLGAN
GQVTYGGISGESFSLDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAV
EDENDHAPTFGSTHLSLEVPEGQDPQTLTTLRASDPDVGANGQLQYRIVDGDPSGAFVLD
LASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYS
VEVPEDAPAGTLLLQLQAHDPDAGANGHVTYYLGAGAAGAFLLEPSSGELRTATALDREQ
CPSYAFSVNAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPNSPLRLRLPRPGPSLSTPTL
ALATLRAEDRDTGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPQDRVLFIVAT
DLGRPARSATGVVIVGLQGESERGPRFPRASSEAVLRENAPPGTPIASPKAVHAGGSSGL
ITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEASPRLRLVLQAESGGAFAFSVLTLTL
QDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPARGLFH
VDPATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPW
ELRVSEDALLGSEIAQVTGNDVDSGPVLWYVLSSSGPQDPFSVGRYGGRVSLTGPLDFEQ
CDHYHLHLLAHDGPHEGHANLTVLVEDVNDNAPAFSQNLYQVTLLEHTPAGSAILSISAT
DRDSGANGHISYHLASPAEGFSVDPNNGTLFTTVGTVALGHEGPGVVDVVLEARDHGMPG
RAARATVYVQLQDQNDHTPSFTLPHYRVAVAEDLPPGSTLLTLEATDADGSRTHATVDYS
IISGNRGRVFQLEPRLAEAGDSGGLGPRALGCLVLLEPLDFESLTQYNLTVAAADRGQPP
RSSAVPVTITVLDVNDNPPVFTRASYHVAVPEDTPIGAELLHVEASDADPGPHGLVRFTL
SSGDPLGLFELDESSGALRLARPLDCETQARHQLVVQAADPAGSHFALAPVIIEVQDVND
HGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLCYSLLEAGPGPEGREVFALN
SSTGELRARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPIFLAPAFHFQ
VPEGARRGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSQAPGSGT
GPSEGGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAV
AASLGVVVVLALAALVLGLVRARSRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEH
LYHQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLA
ARGPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPATATAFLG
GCGLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFT
EIARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISH
EGSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAESGLEPPDDTELHI
NT seq
9894 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggaggcgggcactgcgccttcctgcactggcatgcagagccccaggcccctc
cacctgctcccactgctgctgctgctgctactgctgggggccagggtgccaggcgcctgc
ggccaggctgggagcttggacctgcagattgatgaggagcagccagcgggcacactgatc
ggggacatcagtgcagggcttccggcaggcacagcagcacctcccatgtacttcatctcc
gcgcaggagggcagcggcgtgggcacagacctggccatcgatgaacacagtggggtggtc
cgtacagcccgggtcttggaccgtgagcggcgggatcgctaccgcttcactgcagtcact
cctgatggtgccaccgtagaagttactgtgcgagtggctgacatcaatgaccacgctcca
gccttcccgcgggcccgggctaccctgcagatacctgagcatacagctgtgggcacccgc
tacccgctcgagcctgctcgggatgcagatgctggccgcctaggaacccagggctatgcg
ttgtccggtgatggggctggcgagatcttccggctggagacacgcccgggtccggatggg
gccccagtgcctgagctggtagttactggggagctggaccgagagaaccactcacactac
atgctgcaactggaggcctacgatggtggatcacccccccggagggcccaagcgctgctg
gatgtgacactgctggacatcaatgaccatgccccagctttcaatcagagccgctatcac
gctgtggtgtctgagagcctggcccctggcagcccagtcttgcaagtgtatgcatccgat
gctgatgctggcgccaacggggctgtgacctatgagatcaaccggaggcagagcgagggt
gatggacccttctctatcgacgcacacacagggctgctgcggctggagcgaccgctggac
tttgagcaacggcgggtccacgaactagtagtgcaggcacgcgatggtggagctcaccct
gagctgggctcggcttttgtgactgtgcatgtgcgagatgctaatgacaatcagccctcc
atgactgtcatcttcctcagtgcagatggctctccccgagtgtccgaggctgcccctcct
ggccagcttgttgctcgcatctctgtgtcagacccagatgatggtgactttgcccacgtc
aacgtgtccctggagggtggagagggccactttgccctaagcacccaggacagcgtcatc
tacctggtgtgcgtggctcggcagctggatcgggaggagcgggatgcctataacctacgg
gttaccgccacagactcaggctcacccccactgcgggccgaggctgcctttgtgctgcat
gtcactgatgtcaatgacaacgcgcctgcctttgaccgtcagctgtaccgacctgagccc
ctgcctgaggttgcactgcctggcagctttgtggtgcgggtgatggcccgggatcctgac
cagggcaccaatggtcaggtcacctacagcctcgcccctggcacccacacccgctggttc
tccattgaccccacctcaggcatcatcaccacggctgcctcactggactatgagttggaa
ccccaaccacaggtcattgtggtggccacagatgggggtttaccccctctcacctcctct
gccacagttagtgtggccctgcaagatgtgaatgataacgagcctcagttccagaggact
ttctacaatgcctcactgcctgagggcatccagcctggaacctgcttcctgcaggtgaca
gccacagacgcagacagtggcccatttggcctcctctcctattccttgggtgctggactt
ggggcctcggggtctccccctttccgcatcgatgcccacagtggtgacgtgtgcacgacc
cggaccctggaccgtgaccaaggaccgtcaagcttcgatttcacagtgacagctgtggat
gggggaggcctcaagtccatggtgtatgtgaaggtgtttgtgtcagatgagaacgacaac
ccacctcagttctacccacgggaatatgctgccagtgtgagcacccagagtccaccaggc
acagccgtactgagggtgcgtgctcatgaccctgaccaggggccccatgggcgactctcc
taccacattctggctggcaatagccccccactctttgcattggatgagcgctcagggttg
ttgacagtagcctggcccttggccagacaggccaactctgtggtgcagctggagatcggg
gctcaggatggtggtggcctgcaggcagagcccagtgcccgagtcaacatcagcattgtg
cctggaacccccataccacccatatttgagcaactacagtatgtcttttctgtgccagag
gatgtggcaccaggcaccagtgtgggcatagtccaggcacacaacccaccaggtcgcgtg
ggacctgtggccctggccctatcaggcggggatccccggggactcttctccctagatggg
gcctcagggctgttacaaacgcttcgccctctggaccgggagctgctgggaccagtgctg
gagctggaggtgcgggcaggcagtggtgtgcccccagctttcactgtagctcgggtgcgt
gtgctgctggatgatgtgaatgacaactcccctgccttccctgcacctgaagacacagtg
ttgctgccaccaagcactgccccaggaaccctcatctatacactgcgggctctggaccct
gactcaggcattaacagtcgagtcacatttaaccttcgtgctggaggtggtggggtcttc
accgtggaccccaccacaggccacgtacggcttatgggacctctggggccctccggagga
ccagcccatgagctggacctggaggcccaggatgggggctccccgccccgcaccagccac
tttcgactgagagtggtggtacaggacttggggacccgtgggctggctccccactttgaa
agccctacgtaccgtgtggacctgccttcaggcaccaccactggaactcaggtcctacaa
gtgcaggctcgagcaccagatgggggcccagtcacctatcaccttgcagcagatgggcca
agtatcccttttggcctggagccacagagtgggtggctatgggtgcgggcagcactggac
cgtgaggcccaggagttgtacacactgaaggtaatggcagtgtctgggtccaaagctgag
ttgggccagcagacaggcacagccatagtgagggtcagcatcctcaaccagaacgaccat
agtccccgcttgtctgaggagcccaccttcctggctgtggctgagaaccagccaccaggg
accagtgtgggccgggtctttgccactgaccgagactctggacccaatggacgtctgacc
tacagcctgcgacagctatcagaagacagcaaagccttccacatccacccccagactgga
gaagtgaccacactccaaaccctggaccgtgagcggcagagcagctatcagctcctggtg
caggtgcaggatgcggggagcccaccccgcagtaccacaggcaccatgcacattgcagtg
ctcgacctcaacgacaacagtcccaccttcctgcaagcttcaggggctgctggtgggggc
ctccctatacaggtaccagatcgcgtgcctccaggaacactggtgacgactctgcaggcc
aaggatccagatgaaggggagaatgggaccatcctgtacatgctgactggtcctggctca
gagctcttctctctgcaccctcactcaggggagctgctcactgcagcacctctgatccga
gcagagcggccacactatgtgctgacgttgagcgctcacgaccaaggcagccctcctcgg
acctccagcctccagctgctggtgcaggtacttccctcagctcgctctcctgagcccccg
ccggatccctcagaaccagatcccgcggcgccagtgcctgtagtgctgacggtgacagca
gccgaggggctacagccgggctccctgttgggctcggtagcaccgccagagccggcgggg
atgagcgcactcacctacaccctggtgggtggcgcggacccagacggcaccttcgcgctg
gacgcgacctcagggcgcttatacctggcacggcccctggacttcgaggcaggccccgcg
tggcgcgcgctcacggtgcgcgccgaggggccgggcggcacgggcgcgcggctgctgcgc
gtacaggtgcgcatacaggacgagaacgagcacgcgccagtcttcgcgcgcgatccgctg
gctctggcgcttccggagaaccccgaacccggcgcggcactgtacactttccgcgcgtcg
gacgccgacggcccgggccccaatagcgacgtgcgttaccgcttgctgcgccaggagccg
ccggcgcctgcgctgcgcctggacgcgcgcactggggcgctgagcgcaccgcgaggcctg
gaccgcgagaccacgccggctctgctactgctggtggaagccaccgaccggccggccaat
gccagccgccgccgcgcagcgcgcgtctcagcgcgcgtctttgttacggacgaaaatgac
aacgcgccagtcttcgcctctccctcacatgtacgcctccccgaagatcagccgcctggg
cccgcggcgctacacgtggtagcccgagacccggacctgggcgaggccgcacgtgtgacc
tatcgcctggccgctggtggggatggctacttccggctacactcgagcactggagcgctg
tccctggtgcggcccctggaccgagaacagcgagctgagcacgttctgactgtggtggcc
tcagaccatggctccccgcagcgctcagccacgcagctcctgactgtcagtgtcgccgac
gtcaacgatgaggcacccgctttccagcagcaggagtacagcgttctcttgagggagaac
agcccgcctggcacgtctctactcaccctgcaggcaactgaccccgacctgggggccaac
gggcaagtgacttatggaggcatctctggcgaaagcttctccctggacccagacactgga
gttctcacaactcttcgggccctggatcgggaggagcaggaggagatcaacctgacagta
tatgcccgggacaggggatcacccccgctgttgacccacgttacagtgcgagtggctgtg
gaggatgagaatgaccatgccccaacctttgggagtacacacctctccctggaggtgccc
gagggccaagacccccagacccttaccaccctgcgggcctctgacccagatgtcggagcc
aatgggcagctgcagtaccgcatcgtggatggggacccatcaggagcctttgttctagat
ctagcctctggggagtttggcaccatgaggccactagaccgggaggtggagccagcattc
cagctgcggatagaggcccgggatggaggccagccagctctcagtgccactctgcttgtg
acagtaacagtactggatgccaatgaccatgccccagcctttcctgtgcctgcctactct
gtggaggtgcctgaggatgcgcctgcagggaccctcctgctgcagctacaggctcatgac
cctgatgctggggccaatggccatgtgacctactacctgggtgctggtgcggcaggagcc
ttcctgctggagcccagctctggggaattgcgcacagccacagccctagacagagagcag
tgccccagctatgccttttccgtgaatgcagtggatggcgcagctgctgggcccctgagc
accactgtgcctgtcaccatcacagtgcgtgatgtcaatgaccacgcacccaccttcccc
aacagtcccctgaggctgcgcctgccccgcccaggccctagcctcagcaccccgaccctg
gccctggccactctgcgagccgaagaccgtgacactggtgccaatgcctccatcctctac
cggctggcaggcacaccaccgcctggcaccactgtggattcttacactggtgaaatccgt
gtggcccgctcccctgtagccctgggcccccaggatcgtgtcctcttcatcgtggccacc
gaccttggccgtcccgctcgctctgctaccggtgtagtcattgttggactacagggggag
tccgaacgtggaccccgctttccccgggctagtagtgaagctgtgctccgtgaaaatgca
cccccagggacccccattgcctccccaaaggctgtccacgcagggggctcaagtggactg
atcacatacagcattctcagtgggaatgagaaagggacattctccatccagcctagcaca
ggagccatcacagttcgctcggcagaggggctggactttgaggcaagcccacggctacgg
ctggtgctgcaggcagagagtgggggagcctttgccttctccgtactgaccctaaccctg
caagatgccaatgacaatgctccccgcttcctgcggccccactatgtggccttcctgcct
gagtccaggcccttggaaggacccctgctgcaggtggaggcagatgacctggatcaaggc
cccagtggacagatctcctacagtctggctgcatcccagccagcacggggattgttccat
gtagacccagccacaggcactatcactaccacagccatcctggaccgtgagatctgggcc
gaaacacggctggtactgatggccacagacagaggaagcccagccctagtgggctcagct
accctgacagtgatggtcatcgacaccaacgacaatcgccccaccattccccagccctgg
gagctccgagtgtctgaagatgcgctattgggctcagagattgcacaggtcacagggaat
gacgtggactctggaccagtgctatggtatgtgctaagctcgtctgggccccaggatccc
ttcagtgtaggccgctatggcggccgcgtctccctcacaggccccctggactttgagcag
tgtgaccactaccacctgcatctgctggctcatgatgggcctcatgagggtcatgccaac
ctcacagtgctcgtggaggacgtcaatgacaatgcacctgccttctcacagaacctctac
caggtgacgctgcttgagcacacacccgcaggcagtgccattctctccatctctgccact
gaccgggactcaggtgccaatggtcacatctcctaccacctggcttcccctgccgagggc
ttcagtgttgaccccaacaacgggaccttgttcacgacagtgggaacagtggccttgggc
catgaggggccaggagtggtggatgtggtgctggaagcacgagaccatgggatgccaggc
cgggcagcacgagctacagtgtatgtgcagctgcaggaccagaatgaccacaccccgagc
ttcacattgccacattaccgcgtggctgtggctgaggacctgccccctggttccaccctg
ctcacgctggaggccacagatgccgacggaagccgcacccatgccaccgtggactatagc
attatcagtggcaaccggggccgagtcttccagctggaaccccggcttgctgaagctggg
gatagtggtggactaggcccccgggcactgggctgcctggtgttgcttgagcctctagac
tttgaaagcctaacccagtacaatctaactgtggccgcagctgaccggggacagccacct
cgaagctcagccgtgccggtcaccatcactgtcctggacgtcaacgacaacccacctgtg
tttacccgagcatcctaccacgtggcagtacctgaagacacacctattggggctgagctc
ctgcatgtggaggcctctgatgctgacccaggccctcatggcctcgtgcgtttcaccctc
agttcaggtgaccctttggggctctttgagctggatgagagctcgggcgccctgcgactg
gcccgccccttggactgtgagacccaggctcggcatcagcttgtagttcaggctgccgac
cctgcggggtcacactttgctctggcaccagtgattattgaggtccaggatgtgaatgac
cacggcccagccttcccactgagcttgctcagcaccagcctggcggagaaccagcctcca
ggcactcttgtgaccactctgcacgcgattgatggggatgcaggggcttttgggaggctc
tgctacagcctgttggaagccgggccagggcctgaaggacgtgaggtatttgcactgaac
agttcaacaggggagttgcgggcacgagtagcctttgactatgagcacactggaagcttc
cagctgcttgtgggcgctgccgatgctgggaatctctcagcctcagtcactgtgtcagtg
ctggtgacaggcgaggatgagtatgacccaatattcctggctccagctttccacttccaa
gtgccagaaggtgcccggcgtggccacagcctgggtcatgtgcaggccacagatgaggat
ggaggtgctgatggcctggtgctctattctcttgctacgtcttccccctacttcggtatc
aaccagactacaggtgcgctgtatctgcgggtggacagtcaggcaccaggcagtggaaca
ggcccctctgagggtgggggccggactcggcgtgaagcaccacgggagctgaggctggag
gtggtggcacgggggcctctgcctggttcccggagtgccacagtgcccgtgaccgtggat
atcacccacactgcgctgggcctagcacctgacctcaacctgttattggtgggggctgtg
gcagcatccctgggagtagtggtggtgcttgcactggcagccctggtcctagggctagtg
cgggcccgaagccgcaaggcagaggcagcacctggcccaatgtcacaggcagcacccctg
gccagtggctccctacagaaactgggccgagagccacccagcccaccgccctccgagcac
ctctatcaccagactctcccaagctatggtgggccgggagctggaggtccctacccccgg
ggtggctccctggacccttcacattcaagcggccgaggctcagcagaggctgcagaggat
gatgagatccgcatgatcaacgagttccctcgtgtggccagcgtggcctcttccctggct
gcccgtggccctgattcgggcatccagcaggatgcagatggactgagtgacacatcctgc
gagccacctgcccctgacacctggtataagggacgcaaggcagggctactgctgccgggt
gcaggagccactctgtaccgagaagagggccccccagccactgccacagccttcctggga
ggctgtggcctgagccctgcacccactggggactatggcttcccagcagatggcaagcca
tgtgtggcaggtgcactgacggccattgtggctggcgaggaagagctccgtggcagctat
aactgggactacctgctgagctggtgccctcagttccagccacttgccagcgtctttaca
gagattgcccggctcaaggatgaagctcggccatgtcccccagctccccgtattgatcca
ccacccctcatcactgccgtggcccacccaggagccaagtctgtaccccctaaaccagcc
agcacggctgcaacccgggccatctttccgccggcctctcaccgatcccccatcagccac
gaaggctccctgtcctcagctgccatgtcccccagcttctcaccctcactgtctcctctg
gctgctcgctcacctgttgtttcgccgtttggggtggcccagggcccctcagcctcagca
ctcagcgcagaatccggcctggagccacccgatgacacggagctgcacatctag
DBGET
integrated database retrieval system
