Rhinolophus ferrumequinum (greater horseshoe bat): 117030292
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Entry
117030292 CDS
T07722
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117030292 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117030292 (PATL1)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117030292 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
117030292 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
117030292
NCBI-ProteinID:
XP_032976190
Ensembl:
ENSRFEG00010003051
UniProt:
A0A671E1I5
LinkDB
All DBs
Position
11:10529541..10557192
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AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVTVNEQTGNGERDEIDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQSQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPAVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICSMYENLRGKLPGQERTSDDHFVQIMCIRKGKRMVAR
ILPFLPTEQAVDVVLTTVRNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTGLLQQL
MNLPQSAAAPAPSNPHLAAVLQNKFGLSLLLLVLSRGEDLQSSDHAAESTENSQWAEVMF
MATRELLRIPQAALAKPVSTPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgactagctgaattggaagagaagcta
ccagtgacagtcaatgaacaaacaggcaatggagaaagggatgaaatagatttgttgggt
gaccatgaggagaatctggcagaaaggctgagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttgcaatcccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggagatgcctgcggtgtctgtattagaatatgccttgcctcagaggcccccccag
ggcccagaagatgatcgggacctttctgagcgtgcattaccaaggcggtccacttcacct
atcatcgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtccccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccacggtatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaactcttccctcctgggtcacccctttcctcctagcgttcctcctgtgctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcctaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccctgctacaccacctcctccacagcagcacccccctggcccaggacctcac
ctgcaaaatctaagatctcaggccccaatgtttagacccgacaccactcacctccatcca
cagcaccgtcgactcttgcatcagagacagcaacagaatagaaatcagcatcggaatctc
aatggtgcaggagacagaggaagtcaccggagcagtcatcaggaccatctccggaaggac
ccatatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaatccagatgatg
caactgcagagcactgatccctacctggatgatttttattaccagaattactttgaaaaa
ctggagaaattgtcagctgctgaagaagtgcaaggtgatggccccaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtgacatctcggagtgaagatgatgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctacagtttactccttgacgtggaggattat
gaaaggcgttatctcctaagtctagaagaagagcgacctgccttgatggatgaaagaaag
cacaaaatctgtagcatgtatgaaaacttgagggggaaattgcctggacaagagaggaca
agtgatgaccactttgtacagatcatgtgtatccggaaagggaagcgaatggtcgcccgt
attctccctttcctccccacagagcaagcagttgacgttgtcctgacaacagtcaggaac
ctccctttccttatcaagaaggatgcacaagatgaggtgctgccgtgcttattgagtccc
ttctctctgctcctctatcatcttccatcagtgaccgtcactggccttctgcagcagctg
atgaacctacctcagagtgcagccgcaccagccccctccaaccctcacctcgctgctgtg
ctccagaacaagtttggcctgtcactgctcctcctcgtcctgagccgtggggaagacctt
cagagttcagaccatgctgcagaatcaacggaaaacagccagtgggcggaggtgatgttc
atggccacccgagaactcctgaggattccccaagcagccctggccaagccagtctctacc
cccacaaacctagtatctctcttttctcgctatgttgaccgtcagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacgataa
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