Rhinolophus ferrumequinum (greater horseshoe bat): 117030903
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Entry
117030903 CDS
T07722
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117030903 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117030903 (CSTF3)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117030903 (CSTF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
117030903
NCBI-ProteinID:
XP_032977042
Ensembl:
ENSRFEG00010005374
UniProt:
A0A671E3W2
LinkDB
All DBs
Position
11:24525683..24590775
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AA seq
717 aa
AA seq
DB search
MSGDAATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacgcagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaaccaagggcaaacttccaagttacaaagaa
aaaatggctcaagcatatgattttgcactggataaaattggaatggaaattatgtcttat
cagatctgggtggattacatcaatttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgttcgaagggtttatcaacggggttgtgttaacccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgatcgaagatcggagtagagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtgatgaaaggtttggaccgcaatgcaccctcagtgcctcctcag
aatactccgcaagaagctcagcaggtggacatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagactcttataacaaaaagagttatgtttgcttat
gaacagtgcctacttgtgctgggccatcaccctgatatttggtatgaagctgcccagtat
cttgagcagtcaagtaaactgctcgcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataacagactcctggcaattgaggatattgaccccaccttggtatatatccag
tatatgaaatttgcaagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgacaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaagaaatat
ggagacattccagaatatgttctggcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagttttaacatctggaagccttcctcctgagaag
tcaggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatctagctagt
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtagatagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcacttggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagatactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacaccctgtccctggtggagtattcccagtacctcctgcagctgttgttttaatg
aaacttctccctcctcctatctgttttcagggtccttttgtacaagtggatgaactaatg
gaaattttccgaagatgtaagattccaaatactgttgaggaagctgtgaggatcattacc
ggtggagccccagagctagctgtggaaggcaatggcccggtggaaagtaacgcagtactc
accaaggccgtcaaaaggcccaacgaggattcagatgaggatgaggaaaagggagctgtc
gtcccccctgttcatgacatttacagagcacggcagcagaagcgaattcggtga
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