Rhinolophus ferrumequinum (greater horseshoe bat): 117031042
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Entry
117031042 CDS
T07722
Symbol
TRIM21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
117031042 (TRIM21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117031042 (TRIM21)
04131 Membrane trafficking [BR:
rfq04131
]
117031042 (TRIM21)
04121 Ubiquitin system [BR:
rfq04121
]
117031042 (TRIM21)
Enzymes [BR:
rfq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117031042 (TRIM21)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117031042 (TRIM21)
Membrane trafficking [BR:
rfq04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117031042 (TRIM21)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117031042 (TRIM21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Sina_RING
zf-Nse
zf-RING_10
zf-rbx1
zf-RING_4
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117031042
NCBI-ProteinID:
XP_032977216
Ensembl:
ENSRFEG00010014175
UniProt:
A0A671FBC5
LinkDB
All DBs
Position
11:47073226..47080923
Genome browser
AA seq
469 aa
AA seq
DB search
MASAMPLAMMWEEVTCPVCLDPMVEPVSIECGHSFCNECISQVGKGGGSVCPVCRNKFLL
RNFRPNRQLANLVDNLRQISQNAKEGTQKKQCRVHGEKLHLFCEKDGTTLCWVCSQSRKH
RDHPMVPIEEAAQEYQEKLQVALGKLRQEQESVEKLEVDIATKRTDWKRKVETHKLRIHA
EFEQQKIFLAEEEQRQLQKLEKDEREQLRILGEAEMELAQNREDLQELIAELEQRSRSSD
LELLQEVKSVLERSESWNLKELNIDSPDLRSVCHVPGLKKMLRTCGVRITLDPHTANPWL
ILSEDRQLVKLGETQQKVPENEERFDTYPMVLGSQRFESGKFYWEVDVTGKAAWDLGVCR
ESVQRKGYFLLNPDNGFWTIWLWDKQKYEAGTCPETPLQLSVPPCQIGIFLDYEARTVSF
YNITDHGSLIYTFSECAFTGPLRPFFNPGFNDGGRNAAPLTLCPLRMGW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcaatgcccttggcaatgatgtgggaggaagtcacatgccctgtctgcctg
gatcctatggtggagcctgtgagcattgaatgtggccacagcttctgcaacgaatgtatc
tctcaggttgggaaaggtggaggcagtgtctgtcctgtgtgccggaacaaattcctgctc
aggaacttccggccaaatcgccagctagccaacctggtagacaacctaagacaaatcagc
cagaatgccaaggagggcacacagaagaagcaatgtagagtacatggagagaaacttcac
ctattctgcgagaaagatgggaccaccctttgctgggtgtgttcccagtcccggaaacac
cgtgaccatcccatggtcccgattgaggaggctgctcaggaataccaggagaagctccag
gtggcattagggaaactgagacaagaacaagagtcggttgagaagttggaagtggatatt
gctacaaagagaacagactggaagagaaaggttgagacacacaaattgaggattcatgca
gagtttgagcagcagaaaatcttcctggctgaagaggagcagaggcaactgcagaagctg
gagaaggatgagagggaacagctgagaatcctgggggaggcagaaatggagctggcccag
aacagggaggacctgcaggagctgatcgcagagttggagcagaggagtcggagctcagac
ctggaactgctgcaggaggtgaaaagtgtcctggaaaggagtgagtcctggaacctgaaa
gagctaaacatcgactccccagacctgaggagtgtgtgccatgtgccagggctgaagaag
atgttgaggacgtgtggagtacgcattactctggatccacacacagccaatccgtggctc
atcctttcagaggatcggcaactagtgaagcttggagagacccagcagaaggtgcctgaa
aatgaggagagatttgatacttatcccatggtcctgggttctcagcgctttgagtctgga
aaattttactgggaagtagatgtgacaggaaaggcagcctgggacctaggggtttgtaga
gagtctgtgcaaaggaaggggtatttcttgcttaaccccgacaatggcttctggacaatt
tggctgtgggacaaacaaaaatatgaggctggcacctgccccgagactcccctccaactt
tcggtgcctccatgccaaattgggatcttcctagattacgaggcccgcactgtctccttc
tacaacatcactgaccacggctccctcatctacaccttctctgaatgtgccttcactgga
cccctgcggcccttcttcaatcctggattcaatgatggaggaagaaacgctgcccctcta
accctctgtccactgaggatgggatggtag
DBGET
integrated database retrieval system
