Rhinolophus ferrumequinum (greater horseshoe bat): 117031609
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Entry
117031609 CDS
T07722
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfq02000
]
117031609 (TMC1)
03037 Cilium and associated proteins [BR:
rfq03037
]
117031609 (TMC1)
Transporters [BR:
rfq02000
]
Other transporters
Pores ion channels [TC:
1
]
117031609 (TMC1)
Cilium and associated proteins [BR:
rfq03037
]
Other cilia and associated proteins
Stereociliary proteins
117031609 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
117031609
NCBI-ProteinID:
XP_032977975
Ensembl:
ENSRFEG00010009472
LinkDB
All DBs
Position
12:38597942..38755443
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AA seq
763 aa
AA seq
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MPPKKVQIQVEEKEDDTEESSSEEEEEEEEEEDKLPRRESMRPKRKRTRDVISEDDPPPE
PEDEETKKAREKERRKKLMRGAEDDDEIDEAELERLKAELDEQRLMIATVKCKPWKMEKK
IEVLKEAKQFVNENEGALGKGKGKKWFAFKMMMAKKWVKFLRDFENFKAACVPWENKIKA
IESQFGSSVASYFLFLRWMYGVNMVLFILTFSLVMLPEYLWGLPYGTIPRKTVPRAEEDS
AANFGVLYDFNGLAQYSVLFYGYYNNQRTIGVLNFRLPLSYFLVGLACIGYSFLVVLKAM
TQNIGDDGGDDNTFNFSWKVFTSWDFLIGNPETADNKFNSITMNFKEAILEERAGEIEEN
VHLIRFLRFLANFFVFLTLAASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLG
MFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEIYNKIEEEKLVKA
NITLWEANMIKAYNSSVTGNGTAAPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYV
TILVGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSL
PGINILRLYVSMYFQGWAVMCCNVPEARVFKSSKGNTFYLGMLLLILFLSTMPVLYMIVC
LPPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAMVLRQLSNPALMLAVALVMVLTIYYLN
ATAKGQKAANLDLKKKMKQQALENKLRNKKMAAARAAAAAGGQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagaaagtgcaaatccaagtggaggaaaaagaagatgatactgaggaaagt
tcaagtgaagaggaagaggaggaggaggaggaggaagataaactacctagaagagaaagc
atgagaccaaagaggaaacggaccagagatgttatcagtgaggatgatccgccacctgaa
ccagaggatgaagaaacaaagaaggccagagaaaaagagaggagaaaaaagttgatgaga
ggagcggaagatgatgatgaaattgatgaagcggaattggaaagactgaaggcagagtta
gatgagcaaagactaatgattgctactgtcaaatgcaaaccatggaaaatggagaagaaa
attgaagttctcaaggaagcaaaacaatttgtgaatgaaaatgaaggtgcccttgggaaa
ggaaaaggaaaaaaatggtttgcatttaagatgatgatggccaagaaatgggtaaaattt
ctccgtgattttgagaacttcaaagctgcttgtgtcccatgggaaaataagatcaaggca
attgaaagtcaatttggttcatcggtggcctcatacttcctcttcttgagatggatgtat
ggagtaaatatggttctcttcatcctgacatttagcctcgtcatgttgccagagtacctc
tggggtttgccatatggcactatacctagaaaaacagttcccagagctgaagaggactct
gcagcaaactttggcgtgttgtacgacttcaatggtttagcgcaatactctgtcctcttc
tatggctactacaacaatcaacgaacaattggagtgctgaatttcagattgccactctcc
tattttctagtggggctcgcgtgcattggatacagctttctggttgtccttaaagcgatg
acccaaaatattggtgatgatggtggtgatgacaacactttcaacttcagctggaaggtg
ttcaccagctgggatttcctgattggcaatcctgaaacagcagacaataaattcaattct
atcacaatgaacttcaaggaagccatattggaagaaagagcgggcgaaatagaagaaaat
gtccacttgatcagattcctgaggtttcttgctaacttcttcgtgtttctaacacttgct
gcgagtggatacctcatcttttgggctgtgaagcgatcccaggaattcgcacagcaagac
cctgacacccttgggtggtgggaaaaaaatgaaatgaacatggtcatgtccctcctgggg
atgttctgtccgacactgtttgacttatttgctgaattggaagactaccatcccctcatt
gctctgaaatggctactgggacgcatttttgctcttcttttaggcaacttgtatgtattt
attcttgccttgatggatgagatttacaacaagatcgaagaggagaagcttgtaaaggcc
aatattaccttatgggaagccaacatgatcaaggcctacaattcatcagtcactggaaat
ggcactgccgcacccttttttgtacaccctgcagatgtacctcgaggaccctgctgggaa
acaatggtgggacaggaatttgtgcggctgactgtttctgatgttttgaccacctatgtc
acaatcctcgttggggactttctcagagcatgttttgtaagattttgtaattactgctgg
tgctgggatttggaatatggatatccttcatacacggagtttgacatcagtggcaacgtc
ctcgctctgatcttcaaccaaggcatgatctggatgggctctttctttgctcccagcctc
ccaggcatcaatattcttcgactctatgtatccatgtacttccaaggctgggccgtaatg
tgttgcaatgttcctgaggccagagtcttcaaatcgtccaaagggaatacgttctacctg
ggcatgctcttactgatcctcttcctgtccaccatgcctgttctgtacatgattgtatgc
ctcccgccatcttttgattgtggacccttcagtggcaaaaataggatgttcgaagtcatt
ggagaaacactggagcatgatttcccaagctggatggcaatggtcttgagacagctttcc
aatcctgcactgatgcttgctgtggctttggttatggttttgaccatctattaccttaat
gccactgctaagggccagaaggcagcaaacctggatctaaagaagaagatgaaacagcaa
gctttggagaacaaactgcgaaacaagaaaatggcagctgcacgagcagctgcagctgct
ggtggccagtaa
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