Rhinolophus ferrumequinum (greater horseshoe bat): 117031884
Help
Entry
117031884 CDS
T07722
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117031884 (RC3H2)
04121 Ubiquitin system [BR:
rfq04121
]
117031884 (RC3H2)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
117031884 (RC3H2)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117031884 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117031884
NCBI-ProteinID:
XP_032978658
Ensembl:
ENSRFEG00010020390
LinkDB
All DBs
Position
12:complement(73002466..73044471)
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRNADSTLRALETVKKVGKVGTNSQNAPGPSSE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMSSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQQPSETRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYAEEATDTKPDRDIELELSALDTDEPDGQSEQIEEILDI
QLGINSQNDQLLNGTAVENGHPVQQHQKEPLEQKRHSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSVSAGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtacttcctgtcaactttgcacttctccagttagttggagcccaggtaccagac
catcagtcaataaagttaagtaatctaggtgagaacaaacactatgaagttgcaaagaaa
tgcgttgaagatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtagaggaagaaggtcgagtaagagccatgcgagcagcccgttcacttggagaa
agaactgtaacggaactaatattacagcaccagaaccctcagcaattgtctgccaactta
tgggctgctgtcagggcgcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttctctgatgcagctaaaggaggaatttcggagttatgaggcattacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcctcactgctatatggtgacttggcgcataagtcacacatgcagtctattattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggagacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccccaatccagatgctgtttcaccaacttgggagcagctggaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaactacagtagaaaaggccat
gagacacctcagccccagccaaacagcaaatataagacgagcatgtgccgagatctgcga
cagcaaggagggtgtccacggggaacaaactgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttccaatgcagaa
aacagtgtttcccagctaatcccacgtaatgctgacagtacattaagagctctggagact
gtgaagaaagtggggaaggttggcactaacagtcagaatgctcctgggccttcttcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaacgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataaccagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggacacagataccctttgaagtcccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccaccggcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgagttcttctccttaccaacctcctcctccgcagccatat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtatgacagcaggcgcatc
tggcgtccacccatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtctatcagacgtctttgcgagaaagatataactccttagat
gggtattattcagtggcttgtcagcaaccaagtgaaacaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagacttccgcactgatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggaaccattggctcctgtataaatgccatcgattcagagcccagagatgtgatcgct
aattcaaatgctgtgttaatggacctggacagtggagatgttaaaagaagagtacattta
tttgaaactcagagaaggacaaaagaagaagacccaataattccttttagcgatggacct
atcatctcaaaatggggtgcaatttccagatcttcccgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaaggtggagttcatatggtaacgaggccacatca
tcagcacactatattgaacgggacagattcattgttactgatttatctggtcatagaaag
cattccagtactggagaccttttaagcattgaacttcagcaggccaagagtaactcattg
cttcttcagagggaagccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttgaatcttctaagcaaggaaattgaattgagaaatggagagagt
gattatgcagaagaggctaccgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgacggacagagtgaacaaattgaagagatcctggacata
cagcttggcatcaattctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg
catccagtccaacagcaccaaaaggagccattggagcagaagagacacagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccattagcaatgcaagttgcctgcccatcaccacatctgtcagcgct
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaatgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
