Rhinolophus ferrumequinum (greater horseshoe bat): 117032261
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Entry
117032261 CDS
T07722
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117032261 (SMC5)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117032261 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SYCE1
AAA_21
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
117032261
NCBI-ProteinID:
XP_032979511
Ensembl:
ENSRFEG00010007849
UniProt:
A0A671EEU4
LinkDB
All DBs
Position
12:36828911..36898806
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AA seq
1098 aa
AA seq
DB search
MATPSGKTSTPTPLASKRAAPRDPSSEVPSKRKSSAPPLPAGPFVEGSIVRIAMENFLTY
DICEVCPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSKGMIE
IELFRTSGNLVITREIDVAKNQSSWFINKKSTTQKVVEEQVAALNIQVSNLCQFLPQDKV
GEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMVQRNE
RYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRVKDEVRKLKEGQI
PMTRRIEDMETQRHNLEARIKAKATDIKETSQKCKQKQDIIERKDKHIEELQQALTVKQN
EEHDRQRRISNTRKMIEDLQNELKTTENCVNLQPQIDAITNDLRRVQDKKELCEGEIIDK
HKERETLEKEKKSVNDQIVQFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDKFKQGVYEP
IMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRVNTVIAPKSS
YADRAPSRSLNELKQYGFFSYLRELFDAPAPVMSYLCCQYHIHEVPVGTERTRERIERVI
QETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEHLKEVNR
KLRAVESGLIALRERNKHLEYEDNELRQKKKELLERKTKKRQLEQKISSKLGSLKLMEQD
TCNLEEEERKANTRIKEINVQKAKLVTELTNLIKTCTSLHIQKVDLILQNTTVISEKNKL
ESDYMAASSQLRSTEQHFIELDESRQRLLQKCKELMKRARQVCNLTAEQNIPQEYQTQVP
TIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVDEYTKREEEIVQLT
EELKIKKVELDKYRENISQVKERWLNPLKELVEKINEKFSSFFSSMQCAGEVDLHTENEE
DYDKYGIRIRVKFRSSTLLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQG
MDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNKWN
LKAFQRRRRRITFTQPSQ
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagtgggaagacctcaactccaacccccctggcctccaagagagctgcc
ccgagagatccctcgtcggaggtcccgagcaagagaaagagttctgcgcccccactgccg
gccgggcctttcgtggaaggctccatcgtccgcatcgcgatggagaacttcctaacgtat
gatatctgtgaagtatgtcctggaccccacttgaatatgattattggagctaatggaaca
gggaagtccagcattgtgtgtgccatttgccttggattagcaggcaaaccagctttcatg
ggacgggcagataaggttggcttttttgtgaagagaggatgttccaaaggcatgattgaa
attgagttgttcaggacttctggaaatcttgtaattacccgtgagattgatgtggcaaaa
aatcagtcgtcttggttcatcaacaaaaaatcgacaacccagaaagtagtagaagagcag
gttgcagccttaaatattcaagtgagcaatctttgccagtttctacctcaggataaagtt
ggagaatttgctaaactcagtaaaattgaactcctggaagctactgagaagtcaattggg
cctccagaaatgcacaggtaccactgtgaactgaaaaacttcagggagaaggaaaaacaa
ctagagacctcatgcaaagagaaaactgaatatctagagaaaatggttcagaggaatgaa
agatacaaacaagatgtggagaggttctatgaacgtaagcgacatttagatttgattgag
atgcttgaagcaaaaaggccatgggtggaatatgaaaatgttcgtcaggaatatgaagaa
gttaaactagctcgtgaccgagtgaaagatgaagtcagaaaacttaaagaagggcagatt
cctatgacacgtcgaattgaagatatggaaacacagcgtcacaatttggaggctcgaatc
aaagcgaaggcaacagatattaaggagacatctcaaaaatgcaaacaaaagcaagatatt
atagaaaggaaagataagcatatcgaggaacttcagcaggctttaacagtaaaacaaaat
gaagaacatgaccgacagaggagaataagtaatacccgcaaaatgatagaagatttgcaa
aatgaactgaagaccacagaaaactgtgtgaatcttcaaccccaaattgatgccattaca
aatgacctgagacgagttcaagataaaaaggaattatgcgaaggcgagatcatcgataag
cataaagagagggaaactctagagaaggagaaaaagagtgtgaatgatcaaattgtacag
tttgacaatcttatgaatcaaaaggaagataagctgcgacagagataccgtgacacgtat
gatgctgttttatggctgagaaataacagagacaaatttaagcaaggagtctatgagccc
ataatgcttacgatcaatatgaaagataataaaaatgctaaatatattgaaaatcatatt
ccatcaaatgacttgagagcctttgtatttgagagtcaagaagatatggaagttttcctc
aaagaggttcgtgacaataaaaaattgagagtaaatactgtgattgctcccaagagttca
tatgcagacagagcaccttcaagatctttgaatgaactaaaacaatatggatttttttct
tacttgcgagagttgttcgatgcacctgctcctgtcatgagttacctttgctgccagtat
catattcatgaagttcctgtaggaactgaaaggaccagagaaagaattgaacgggtaata
caagaaacacggttaaaacaaatgtatacggcagaagagaagtatgtggtgaaaacttct
ttttattcaaacaaagttatttctagtaacacatccctaaaagtagcccagtttctcaca
gttactgtggatctagagcaaagaagacacttagaagaacatctaaaggaagttaataga
aaattacgagcagtggaatcagggttgattgccttacgtgagagaaacaaacatctagaa
tacgaagataatgaacttagacaaaagaagaaggagcttcttgaaaggaaaaccaaaaaa
agacaactggaacaaaaaattagttccaaactaggaagtttaaagctgatggaacaggat
acttgcaaccttgaagaggaagagcggaaagcaaataccagaatcaaagaaataaatgtt
caaaaagcaaaacttgttacagaattaacaaacctgattaagacttgcacttctttgcat
atacaaaaggtagatttaattcttcaaaatactacagtgatctccgagaagaacaaatta
gaatcagattatatggctgcatcatcacagctacgtagtacagagcaacatttcattgag
ttggatgaaagcagacagagattattgcagaaatgtaaggaactcatgaagagagctagg
caagtgtgtaacctgactgcagagcagaacattcctcaagagtaccagacacaagtaccc
accattccaaatggacacaactcctcaccccccatggctttccaagatcttccaaacaca
ttggatgaaattgatgctttattaactgaagaaagatcaagagcttcttgcttcacagga
ctgaatcctacagttgttgatgaatacacaaaaagagaagaagaaatagtgcaattaact
gaagaactaaagataaagaaagttgaactggataaatatagggaaaacatttcacaggta
aaagagaggtggcttaatcctttaaaagagctggtagaaaaaattaatgaaaaattcagc
agttttttcagttctatgcagtgtgctggtgaagttgacctccatacagaaaatgaggaa
gactatgataaatatggaattcgaattagagtcaaatttcgcagtagtactctgctgcat
gaattaactcctcatcatcaaagtggaggtgaaagaagtgtttctaccatgttatacttg
atggcacttcaagagcttaataggtgtccattcagagtagttgatgaaatcaatcaggga
atggacccgatcaatgaacggagagtgtttgaaatggttgtaaatactgcttgtaaagaa
aacacttctcagtatttttttattacaccaaagcttctacaaaatctcccttattctgaa
aagatgacagtattatttgtctacaatggtcctcatatgttggaaccaaacaaatggaat
ttaaaggctttccaaagacggcggcgccgtattacattcactcaaccttctcaataa
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