Rhinolophus ferrumequinum (greater horseshoe bat): 117032316
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Entry
117032316 CDS
T07722
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117032316 (SHOC1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117032316 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
117032316
NCBI-ProteinID:
XP_032979631
Ensembl:
ENSRFEG00010019547
LinkDB
All DBs
Position
12:complement(64038335..64096182)
Genome browser
AA seq
1502 aa
AA seq
DB search
MFSTFKYCAIDYVYETVVRKKFCRDAFLLRIPSCLYQDGNYHAGVIDNKFRVPWMRVSAL
LVRGMTDSSILDHWKASLFVEEFLEKKTVRGMVTQINCEFEDVVPSSNANSQNEVEEALL
HTYKDYSEVFTPISCLEKCPLLQAKNQDLFIDEEIIFAYKSYLPTLHTLLSRLKLFLLKD
PLLDFKEQAFTEANFFSERFPFQGGRKGLVKEAFYVDKENFCQEKLEDTVGLNEPSILPE
CEFLISTSFKQVDIPSLSEPKESLNLMPEIINYVDESEELLERDLTTKHGIEDIKCSSTE
ILAIQSQYQPERSEPEYSEPEELEIPLTYLHLKETQHFSVNSLCTGLQTFPCSPACTLNL
LTAEESANECYRAGQLESCRSFLLPVPRTEEPNSQYSVTDLKKILSVEEECFVVNPVNPE
WWKEAGLNLTVTESLEPLTTRLCHHDLSSNDTKEEIFLPTKVLHLEEWLDHKSCSSPIAL
INEESTNDNLSPPQKSPPLAKEVPDLCLSDENISVKSPTREEKTKNDQELACRLVQTKEN
KDYLELDCTVISTESSPSSNIEKASFKHGKKWENDLDPLSNFIMLRNKHKTCTSKTEVID
IDEKDDKEDHSLTLQEESPIVCTNKTPEKINQERRADDVIEIQASDSQCQAYCLLEAAAT
PILAKLGRLCTLPVANWKFATVIFDQTRFLLKEQEKVISDALHQGTNDEKEMTFKHAALL
HLLVTSRDVLLTCSLDTALGYLSNAKDVYKSILGSYLDDIWRQLKIVQFIREKKPETNYR
IQELQCQILNWMQSEQQIKVLIIIRMDSDGETHLLIEILNKMEGLKLTVLHSNKRKDFLE
SEGVLNGESSCVVVHNRYIGPDFPWSNFSFVVEYNYLENSCWTKHCEKLNIPYTAFKVIL
PDTVLKRSTLLDSFSGFLLEIQIPYVFFASEGLLNTPQILQLLESNYNITLVERCCSESL
KLFGSTECYVVVTIDECTAVILQDLEELNCEKASDNIIMRLMALSFQYSYCWLILYTKKP
LNSEYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTS
KRDPHEWLDKSWLEVSPSKEETYLLDFPCINPLVAQLMLNKGPSLQWILLATLCQLQELL
PEVPEKVLKHFCSTTSLFKISSPSTTKSPQISSPQENRYQTFTSQSSAFGSSESVIQEHN
EYYQYSDLGETVQEYTSTTSNYNSSLMELREMPCVLPPGTSYSQTSYWKDSCCNANIVQN
NPFLINIESRNSAGNSFLHQNDSQSDVFSLGLTQMKCETRISPVDTQKRVPPNFVNYQKK
GTHEAKRPTNEEVSAPIFSLEGSQFPLHWNLKKNLWKQQNHSFNLQYGAEQTTCDKWYSQ
KDNLCTNQQKYLSNELEGFIYASSNAGSKETVWKELPSVPSLDLFCASDSNVNQKEFNSL
YFYQRAGKCLGPKRHSESSSNSEDKKSLTDFMCAQLPQCKKRRLVYEKIPGRVDGQTRLR
FF
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacgttcaaatattgtgcaatagactacgtatatgagactgtagttagaaag
aagttctgcagagatgcttttttgcttcgaatcccttcatgtttatatcaagatggaaat
tatcatgcaggagttattgataataaatttagggtgccatggatgagagtctcagctctt
ttagttcgaggaatgacagatagctcaatcttggatcactggaaagcaagtctctttgtg
gaggagttccttgagaaaaaaacagttagaggaatggtgacccagattaactgtgaattt
gaggatgttgttccaagttccaacgcaaactcccaaaatgaagttgaggaagccctctta
cacacttacaaggactacagtgaagtcttcacacccatcagctgtttagaaaaatgtcca
ttacttcaagcaaagaaccaagatttgtttattgatgaagaaataatttttgcctataaa
agttacctaccaaccttgcatactctgttgagtaggctcaaactgtttttgctgaaggac
ccccttttagatttcaaagaacaggccttcacagaagctaattttttcagtgaacgtttc
cctttccaaggaggtcggaaaggtcttgtgaaagaagctttttacgtggataaagagaac
ttttgtcaggagaagctagaagatacagtaggtttaaatgaaccgtcaattttgcctgag
tgtgaattcttaatatctacaagcttcaaacaagttgatattccatcactttcagagcca
aaggagtcattaaacttaatgccagaaataataaattatgttgatgaaagtgaagagctt
ctcgaaagagatcttactaccaagcatggaattgaggatataaaatgcagctccacagag
attttggccattcaaagccaatatcaaccagaacgcagtgaaccagagtacagtgaacca
gaagagttagaaataccattaacttatctacacctaaaagaaacccaacatttttctgtc
aattcattatgtacaggacttcagacatttccatgttctcctgcttgtacacttaatttg
cttactgctgaagaatcagctaacgaatgctatagggcagggcaattagaaagctgcaga
agctttttgcttccagtgccaagaactgaagagcccaacagtcaatactcagttacagat
ttgaaaaagatactttctgttgaagaagaatgctttgtggttaatcccgtaaacccagag
tggtggaaagaagcaggattaaatctgacagtgacagaatctttggaacctctgactaca
cgtctgtgtcatcatgatctatcctctaatgatactaaagaggagatatttttgcctaca
aaagtgcttcatttagaagaatggctagaccacaaaagttgttcctcacctattgcactt
attaatgaggaatctacaaatgataatttatcacctccacaaaaaagtccacctctggca
aaagaagtaccagacctgtgtctttctgatgaaaatatctctgttaaaagtccaacaaga
gaagaaaaaacaaagaatgatcaagaactagcttgtagattagtccaaactaaagaaaat
aaagattacttggaacttgactgcacagtaatatctactgaatcatctccctcttcaaac
attgaaaaagcatcttttaaacatggtaaaaaatgggagaatgatttggaccctttgagc
aactttattatgctgcgaaataaacataaaacttgcacctcaaagactgaagtcatagac
attgatgaaaaagatgataaagaagaccattctttaactcttcaagaagaaagccctatt
gtttgtactaataaaactccagagaaaataaatcaggaaaggcgagcagatgatgtcatt
gaaattcaagcatcagatagccagtgccaagcatactgtctcttagaagcagcagctact
cctatcttagcaaaacttggacgcctctgtactcttcctgttgctaattggaaatttgcc
actgttatttttgaccaaacaaggttcctcttaaaggaacaagaaaaagtaataagtgat
gctcttcaccaaggtacgaatgatgaaaaagaaatgacgttcaagcatgccgctctctta
caccttctggtaacaagtagagatgtccttttaacatgtagcttggacacagcactggga
tatttgtcaaatgcaaaagatgtctacaaaagtattttaggctcctatttggatgacatt
tggagacagctgaagattgtacagtttattagggaaaaaaagcccgaaaccaactacaga
atacaagaattgcaatgtcagatattaaattggatgcaaagtgaacagcaaattaaggtg
ctgattataataagaatggactcggatggtgaaacacatttgctcattgaaatccttaac
aaaatggaaggtttaaagttgactgtcttacattcaaacaaaagaaaagattttctggaa
tctgaaggtgttttaaatggagaaagttcctgtgtagttgtacataatcggtatattgga
ccagatttcccctggagtaatttctcatttgtggtggaatacaactatttagaaaactct
tgttggaccaaacactgcgaaaaattgaatattccatacacggcctttaaagtgattctt
ccagacacagttttaaagagaagcaccttgctggatagttttagtggttttcttttggaa
attcagattccttatgtgttttttgcatctgaaggacttcttaatactccacaaatactt
cagttgctagaatccaactataatatcacattagtggagagatgttgcagtgagtcattg
aaactctttggcagtacagagtgttatgtagtggtgacaattgatgaatgcactgctgta
attttgcaggacctagaagagttgaattgtgagaaggcatcagacaatatcattatgaga
ctgatggcattatcattccagtacagctattgttggttaattttgtataccaaaaaacca
ctaaactcagaatatcatcttacagaaaagacacttcatcacctagcactgatttatgca
gctttggtttcatttgggctaaaatcggaagaactggatgtaaagcttataattgcccca
ggagtagaagagactgcactgataattcgacaaattgctgaccacaatttaatgacctcg
aagagagatcctcatgaatggttggataaatcctggcttgaagtttcaccatctaaggaa
gaaacttacttacttgattttccatgtattaatccattggtggctcagctcatgttaaat
aaaggaccttcgctgcagtggatattattagcaactctttgtcaacttcaggaactccta
cctgaagttccagaaaaagtgttaaagcatttttgtagcaccacttctttattcaagatt
agttctccttccacaacaaaatcacctcaaatttcatcacctcaggaaaacaggtatcag
acctttacttctcagagttcagcttttggctcttcagagtctgtcattcaagaacataat
gaatattaccaatattcagacttaggagagacagtgcaggaatacacaagcaccacttca
aattataactcttccctcatggaactaagagaaatgccatgtgttttaccacctgggact
tcttacagtcagactagctactggaaagactcctgttgtaacgctaacatagtgcagaat
aatccttttctgattaacatagaatcaaggaactcagctggtaactcctttctacaccag
aatgattcacagtcagatgtcttttctttgggcctaacacaaatgaaatgtgaaaccaga
atatcaccagttgacactcagaagagagttcctcctaattttgtaaattatcagaaaaag
ggaacacatgaagcaaaaagacctaccaatgaagaagtatctgcccctatcttctcatta
gaaggctctcaatttcctcttcattggaacttgaagaaaaatttatggaaacaacagaat
cactccttcaacttacaatatggtgcagagcagactacatgtgacaagtggtactctcag
aaagataatttatgcactaatcagcaaaaatatctatcaaatgagttagaaggcttcata
tatgcaagttcaaatgctggaagtaaagagactgtctggaaagaattaccatctgtcccc
agtttggatttattttgtgcttctgattctaatgtaaatcaaaaagaattcaacagtctt
tatttctaccaaagagctggaaaatgtttaggaccaaaaaggcactctgaatcttcatct
aactcagaagacaagaaatcattaacagatttcatgtgcgcacaactaccacaatgcaaa
aaacgacgtctagtgtatgaaaaaatccctggtagagttgatggacaaactcgtctgagg
tttttttga
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