Rhinolophus ferrumequinum (greater horseshoe bat): 117032724
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Entry
117032724 CDS
T07722
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117032724 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117032724 (TRIM54)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117032724 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
DUF349
UvrD_C
PHP
MIF4G_like_2
DUF1421
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117032724
NCBI-ProteinID:
XP_032980219
Ensembl:
ENSRFEG00010012923
UniProt:
A0A671F0M1
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All DBs
Position
13:complement(53385797..53405358)
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKSELLQALAREQE
VKLQRVRGLIRQYGDHLESSSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEDMAMDGEEGNAGTEEERLDGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctcggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaacctgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttctggaggccgtttccgctgcccgtct
tgcaggcatgaggtcgtcctggaccgacatggtgtctacggcctgcagcgaaacctgctg
gtggagaacattatagacatttacaagcaggagtcttcccggccactgcactccaaggct
gagcagcacctcatgtgcgaggaacacgaagaggaaaagatcaatatctattgcttgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaagactgtgaggtg
gccccactgcctaccatttacaaacgccaaaagagcgagctcagtgacggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaagccgtgatcacacagatggaggaggtgtgccag
accatcgaggacaacagccggaggcagaagcagttgctgaaccagaggtttgagaccctg
tgcgcagtgctggaggaaaggaagagtgagctgctgcaggcgctggctcgggagcaggag
gtgaagctgcagcgtgtccggggcctcatccgccagtacggagaccacctggagtcctcc
tctaagctggtggagtcagccatccagtccatggaggagccgcagatggcgctctacctg
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagagccaggctatgaaagcatggagcaattcaccgtgagcgtggagcacgtggcg
gaaatgctgaggaccatagacttccagccaggagcttccggggaggaagaggatgaggac
atggcgatggacggggaggaaggcaacgcagggacagaggaagagcggctggatgggccg
gaaggcctgcactga
DBGET
integrated database retrieval system
