Rhinolophus ferrumequinum (greater horseshoe bat): 117032890
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Entry
117032890 CDS
T07722
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117032890 (GEN1)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117032890 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
117032890
NCBI-ProteinID:
XP_032980471
Ensembl:
ENSRFEG00010006120
UniProt:
A0A671EB77
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Position
13:complement(60503856..60532295)
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AA seq
903 aa
AA seq
DB search
MGVNDLWQILEPVKQHIHLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTLVDVKLVFVMEGEPPKLKAEIMSKRNQIRYGPSEKTWSQKTGRSHFKSVLRECLEL
LECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTMSSIRSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLLQILKGQSLLQRFTQ
WNDKSCYSNQQPLVIKKLAHCSVCSHPGSPKDHKRNGCKLCQTDQSCEPHDCESCCPCEW
HRTEHDRQLVAVENNVRKKACSCEGFPFHEVIEEFLLNKDKLVKEITYQRPDLLLFQRFT
LEKMEWPNHYACEKLLVLLTHYDMLERKLGKRNSNQLQPIRIVKNRIRNGVHCFEIEWKK
PEHYAIEDKHGELVLQTIEEESLFEAAYPEIVAIYQKQKLEIKGKKQKSMKTKSKENNLP
ETDDMSFQLHMTLKPTCEISSKLNLEIFRDSTLPQKSISASLNSLLLSENASGLNTQEQL
MSSSRPLALQQIEAVNKSLISESSQPHTSPCNVSAIADLDLSTIDWEGTSFSNSPAISRN
TFSHGFKSELETPIPNNFKNTPGQLSCEPSWCTTHSNKVLGWDLRKTNPEEHLLSGITDL
HLQDLPSKERMLRNSSHPQEKVQPDVDLNTLSLLTVKESCIANSNSDCPSHLSKSLVGIY
LQNESTNGQILKGDQPFQESYKVNTSIPYSVSNVIVEASNIRAGPPNTFLDQRRKVDVQT
TQKFVMKKSVCLDRHSSDEESVPVFGKAKNATQKMKQSSQQHKPAQFKKKDVNKSSNPQI
HIKKPEQYVQAYKTARNEENYFPDAGTGSLGFQQRHKENDDADTCLDSPLPLCQRLKLRF
QNT
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacttgtggcaaattttggagcctgttaagcaacacatccacttgcat
agtcttagtgggaaaacgattgccgttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattggaacagtcatgaagccccacctcaggaacttattttttcgtatc
tcatacttaacactagtggatgtaaaactagtattcgttatggaaggggagcccccaaag
ctgaaagctgaaatcatgagcaaaaggaatcagattcgatatgggccttctgaaaaaaca
tggtcccagaaaacaggaagatcacattttaaatcagtcttaagagagtgtctcgaactg
ctggaatgcttaggaattccctgggtccaagctgctggggaagctgaagccatgtgtgcg
tacctcaatgccagtggttatgtggatggctgcctcaccaatgatggagacgctttcctt
tatggggcccagactgtttataggaacttcactatgaataccaaggacccacacgttgac
tgttacacaatgtcgtctatcagaagtaaactaggtctggacagagatgctctggttgga
ctagcaatactactaggctgcgattatcttccaaagggagtccctggtgttggaaaagag
caagcattaaaacttttacagattttgaaagggcaaagtttactacagaggtttactcaa
tggaatgacaaatcttgttactctaatcaacaaccactagttattaaaaaactggctcat
tgttctgtgtgttcccatccaggttcacctaaggatcacaaacggaatggatgcaaatta
tgtcaaactgaccaatcctgtgaacctcatgattgtgaatcctgctgtccttgtgagtgg
caccgtacagagcatgataggcagctggttgccgtggagaacaatgtcaggaaaaaagct
tgcagttgtgagggattcccgttccatgaggttattgaagaattccttttgaacaaggat
aaattggtcaaggaaatcacgtaccaaagacctgatttgttattgtttcagagatttact
cttgaaaaaatggagtggcccaatcactatgcatgtgagaaattgttggtgcttttgacc
cactatgacatgctagaaagaaagcttggtaaaaggaactctaatcaactacagcctatt
cgaattgttaaaaaccggatcagaaatggagttcactgctttgaaatagaatggaaaaag
cctgaacattatgctatagaagataaacatggagaattagttctacaaacaatagaagaa
gaatcattatttgaagcagcttatcccgagattgttgctatttaccaaaaacaaaagtta
gaaattaaagggaagaaacaaaaaagcatgaaaaccaagtctaaagaaaacaatttgcca
gaaacagatgatatgagttttcaattacacatgactttaaaacccacatgtgaaatctct
tctaagttaaatttagaaattttccgtgattctacattaccccagaaatctatttctgca
tcattgaatagtttgcttttatctgaaaatgcttccggtttgaatacacaagaacagttg
atgtcttcttcaagacctttggctctgcagcaaattgaagctgtcaataagtctttgatt
tcagaatctagtcaaccccatacctcaccctgtaatgtatccgcgattgctgatcttgac
ttgagcaccattgactgggaaggtacttctttcagtaattctccagctatttcaaggaac
actttctctcatggtttcaagtcagaacttgaaacacccatccctaataactttaaaaat
accccaggacaattgtcctgtgaaccaagctggtgcaccacacacagtaataaagtgttg
ggttgggatcttcgaaagactaaccctgaagagcacctgctttctggcatcactgactta
catcttcaggatttgccttcaaaggagcgaatgcttagaaactcatcgcatcctcaggag
aaagtacaaccagatgttgacctgaacactttgtccctgcttacagtcaaagaatcttgt
attgctaacagtaattctgattgtccatcacatctttcaaagagtcttgtaggaatttat
ttgcaaaatgaatctacaaacggtcaaattctaaaaggagaccagccatttcaagaaagc
tataaagtgaatacttctataccttattctgtcagtaatgtgatagtagaggcctctaac
attagagctggaccaccaaatacctttttagatcagagaagaaaagttgatgtgcagacc
actcagaaatttgtaatgaagaaaagtgtttgccttgacagacactcctctgatgaggaa
agtgtcccagtgtttgggaaagctaagaatgcaactcaaaaaatgaaacagagttctcag
cagcataaaccagcccaattcaagaaaaaggatgtcaacaaatcgagtaaccctcagata
catattaagaaacctgaacagtacgtccaggcttataaaacagctagaaatgaagaaaac
tatttcccagatgcagggacgggttctctgggttttcagcagcgtcataaggaaaacgac
gatgctgatacctgtttggatagtcctcttcctttatgtcagagattgaaactaaggttc
caaaacacttga
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