Rhinolophus ferrumequinum (greater horseshoe bat): 117032912
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Entry
117032912 CDS
T07722
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117032912 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rfq04812
]
117032912 (SPTBN1)
Cytoskeleton proteins [BR:
rfq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117032912 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
117032912 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
117032912
NCBI-ProteinID:
XP_032980531
Ensembl:
ENSRFEG00010012649
UniProt:
A0A671F1I3
LinkDB
All DBs
Position
13:complement(32921266..33103162)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADISIQAERVRGVNASAQKFAMDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIV
YIREQWANLEQLSAIRKARLEEASLLHQFQADADDIDAWMLDLLKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDTLHEQAGALPREHAESPEVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLRNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIIADGSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQQWDTSKGEQVSQNGLPAEQGSPRMAETVDTGEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDDEMNTWIQAISSAISDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacattgagatccagcagcagtacagcgac
gtcaacaaccgttgggacgtggatgactgggacaacgagaacagctctgccaggctcttt
gagcggtcccgcatcaaggcgctagcagatgagcgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaattcccacctcgctcgtgtgtcctgccggatcacagacctgtacgct
gaccttcgagatggacggatgctcatcaagctgctggaggttctctccggagagaggctg
cctaaacccaccaagggacggatgcgtatccactgtctggagaacgtggacaaggccctc
cagttcctaaaggagcagagagtccatcttgagaacatggggtcccatgacatcgtggac
gggaaccaccggctgaccctcggtctcatctggaccatcatcctgcgcttccagatccag
gacatcagtgtggaaactgaagacaacaaagagaagaaatctgctaaggatgcattgctg
ctgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaacttcaccact
agctggagggacggcatggccttcaatgcactgatacacaaacaccggcccgacctgata
gattttgacaaactaaagaaatccaatgcacactacaatctgcagaatgcgtttaacctg
gcagagcagcaccttggcctcaccaagctgttggaccccgaagatatcagtgtggaccat
cctgatgagaagtccattatcacttacgtggtaacatactaccattacttctctaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctccgaccttctggagtggattgaacaa
accatcattattttgaacaatcgcaaatttgccaattcactggttggggttcagcaacag
ctccaggcattcaacacttaccgcactgtggagaagccacccaaatttactgagaagggg
aacctggaagtgctgcttttcactattcagagcaagatgagggccaacaaccagaaggtc
tacatgccccgggaggggaagctcatctctgatattaacaaggcctgggaaagactggaa
aaagcggaacacgagagagaactggctctgaggaatgaactcataagacaggagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagagagacgtggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcctgcagtagaggctgcc
acaaaaaagcatgaggccattgagacagacattgccgcgtacgaggaacgtgtgcaggct
gtggtagccgtggccagggaactcgaggcggagaactaccatgacatcaagcgcatcacg
gcgaggaaagacaatgtcatccggctctgggaatacctgctggagctgctcagggcccgg
aggcagcgtctcgagatgaacctaggcctgcagaagatattccaggaaatgctctacatt
atggactggatggacgaaatgaaggtgctattactatctcaagactatggcaaacacttg
cttggtgtggaagacctgttacagaagcacgccctggttgaagcggacattagcatccag
gcagagcgggtgagaggtgtcaatgcctccgcccagaagtttgcaatggatggggaaggt
tacaagccctgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgttat
caagagctttgccagctggcagctgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaggaggaaggctggatacgggagaaggaaaagatc
ctgtcctccgatgattacgggaaggacctgaccagtgtcatgcgcctgctcagcaagcac
cgggccttcgaggatgagatgagcggccgcagcggccacttcgagcaggccatcaaagaa
ggtgaagacatgatcgcggaggagcacttcggatcagagaagatccgagagaggatcgtg
tacatccgggagcagtgggccaacctggagcagctctcggccattcggaaggcgcgcctg
gaggaggcctcgctgctgcaccagttccaggcggatgccgatgatatcgatgcctggatg
ctggacctcctgaagatcgtgtccagcagcgacgtgggccacgacgagtactccacccag
tccctggtcaagaaacacaaggatgtggcggaggagatcgccaactacaggcccaccatc
gacacgctgcacgagcaggctggcgcccttccgcgggagcacgcagagtccccggaggtc
aggggccggctgtcgggcatcgaggagcggtacaaggaggtggctgagctgacgcggctg
aggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggctgacgcc
tgtgagctctggatcgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagatttgagagcctggaaccggaaatgaataac
caggcttcccgggtcgcagtagtgaaccagattgcacgacagctgatgcacagcggccac
ccgagtgagaaggaaatcaaagcccagcaggacaaactcaacacgaggtggagtcagttc
cgagagctggttgacaggaagaaggacgcacttctctctgccctgagcatacagaactac
cacctcgagtgcaatgaaaccaaatcctggattcgggaaaagaccaaggttatcgaatcc
acccaggacctgggcaacgacctggcaggcgtcatggccctgcagcgcaagctgaccggc
atggagcgggacttggtggccatcgaggcgaagctgagtgacctgcagaaggaggcggag
aagctggagtcggagcaccccgaccaagctcaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccacgctgagaaaccgcgaggcctccctgggcgag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acccagacggctatcgcgtcggaagacatgcccaacaccctgactgaggcagagaagctt
ctcacgcagcatgagaacatcaaaaacgagattgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccaggggcagaccgatgcccagtacatgtttctg
cggcagcggctgcaggctttggacactgggtggaacgagctccacaaaatgtgggagaac
aggcaaaacctcctgtcccagtcccatgcctaccagcagttcctcagggacacgaagcaa
gccgaagccttccttaacaaccaggaatatgttttggcccatactgaaatgcccaccacc
ctggaaggagcagaagcggccattaaaaaacaagaggacttcatgaccaccatggacgcc
aatgaggagaagatcaatgctgttgtggagaccggccggaggctggtgagcgacggcaac
atcaactcggatcgcatccaggagaaggtggactcgatcgatgacagacataggaagaat
cgtgaggcagccagtgagctgctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctgtctctgtggatcaacgaaaagatgcttacagcccaggac
atgtcatacgatgaagccagaaatctgcacagtaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacagaagcagtggtaaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaactcttcacccagagctgtgcggatctggacaaatggctgcacggcctggag
agtcagattcaatctgatgactacggcaaagaccttaccagcgtcaacatcctgctgaaa
aagcaacagatgctggagaatcagatggaggtacggaagaaggagatcgaagagctccag
agccaggcccaggccctgagtcaggaggggaaaagcaccgacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggagctgctggagcccctgaatgaaaggaagcacaac
ctgctggcctccaaagagatccatcagttcaacagggatgtggaggacgagattctttgg
gttggagagaggatgcctttggcgacttccacggatcatggccacaacctgcagactgtg
cagctgttaataaagaaaaatcagaccctccagaaagagatccaggggcaccagcctcgc
atcgatgacatctttgagaggagccaaaacatcatcgccgacggcagtagcctgaacgcc
gaggcgatccggcagaggctggccgatctgaagcagctgtggggcctcctcattgaggag
acggagaagcgccacaggcggctggaggaggcgcacagggcccagcagtactacttcgat
gccgccgaggccgaggcctggatgagcgaacaggagctgtacatgatgtccgaggagaag
gccaaggatgagcagagtgccgtctccatgttgaagaagcaccagattttggaacaagcc
gtggaagactatgcagagacggtgcatcagctctccaagaccagccgggccctggtggcc
gacagccatccggagagtgagcgcattagcatgcggcagtccaaagtggataagctgtac
gcaggtctgaaagaccttgccgaagagaggagaggcaaactggatgagaggcacaggctg
ttccagctcaaccgggaggtggacgacctggagcagtggatcgctgagagggaggtggtc
gcggggtcgcacgaattggggcaggactacgagcatgtcacgatgttgcaagaacgattc
cgagagtttgctcgagacacagggaacattgggcaggagcgcgtggacacggtcaatcac
atggcagatgaactcatcaactctggacattcagatgccgccaccatcgctgagtggaag
gatgggctcaacgaagcctgggctgacctgctcgagctcattgacacgagaacacagatt
ctcgccgcctcctacgaactgcataagttttaccacgatgccaaggagatctttgggcgc
atacaggacaaacacaagaaactccctgaggagctggggagagatcagaacaccgtggag
accttacagagaatgcataccacgttcgagcacgacatccaggctctgggcactcaggtg
aggcagctacaggaggatgcggcccgcctccaggcagcctatgcaggtgacaaggctgac
gacatccagaagcgggagaacgaggtactggaagcctggaaggccctgctggatgcctgc
gagggccgcagggtgaggctggtggacacgggggacaagttccgcttcttcagcatggtg
cgtgacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagcca
agagatgtatcatctgttgaacttctaatgaataatcatcaaggtatcaaagcagaaatt
gatgctcgtaacgacagtttcacaacctgcattgaacttgggaaatccctgttggcgaga
aagcactatgcatctgaggagatcaaggaaaagttacttcagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagaccgatgggagtggttaagactgattttggaggtccat
cagttctcaagggacgccagtgtggccgaggcctggctgctcggacaggagccatatcta
tccagccgagaaataggccagagcgtggacgaggtggagaagctcatcaaacgccatgag
gcttttgaaaagtctgcagcaacctgggacgagaggttctccgccctggaaaggctgact
acgttggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccttcgcccgagccgagcacgaaggtttctgaggagactgagtcccagcagcagtgggat
acttcaaaaggagagcaagtttcccagaatggtttgccggccgaacagggatctccacgg
atggcagaaacagtggacacaggcgaaatggtcaacggtgccgcagaacagaggacaagt
tcaaaagagtccagtcccatcccctcccctacctctgatcgcaaagccaagactgccctc
ccagcccagagtgccgccaccttgccggccagaacccaggagacgccttcggcccagatg
gaaggcttcctgaatcggaagcacgagtgggaggcccacaataagaaagcctcgagcagg
tcctggcacaatgtttactgtgtcataaataaccaagaaatgggtttctacaaagatgca
aagaccgctgcttccggaattccctaccacagcgaggtccctgtgagtttgaaagaagcc
atctgcgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctaagactaaat
gatggaaatgagtacctcttccaagccaaagacgatgatgaaatgaacacgtggatccag
gccatctcctctgccatctctgataaacacgaggtgtccgccagcacgcagagcacccca
gcgtccagtcgggcacagaccttgcccaccagcgtcgtcaccatcaccagcgagtccagt
cccggcaagcgggagaaggacaaagagaaagacaaagagaagcggtttagcctttttggc
aaaaagaagtga
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integrated database retrieval system
