Rhinolophus ferrumequinum (greater horseshoe bat): 117033262
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Entry
117033262 CDS
T07722
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq01524
Platinum drug resistance
rfq03430
Mismatch repair
rfq05200
Pathways in cancer
rfq05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117033262 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117033262 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
117033262 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
117033262 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117033262 (MSH2)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117033262 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
117033262
NCBI-ProteinID:
XP_032981238
Ensembl:
ENSRFEG00010005356
UniProt:
A0A671E809
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Position
13:complement(38350330..38413437)
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLDSVAEFGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNSDLSTSIGVVGVKMSTVDGQRQVGVGYVDSVQRKLGLCEFPD
NDQFSTLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKRTDFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQIAVSSLSAVIKYLELLSDDSNFGQFEMTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPHVIGA
LEKYEGKHQTLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISTARDLGLDSGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSTLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIKLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCELAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQNIGESQENDEMEPAAKRCYLEREEGEKIIQEFLCKVKQMPLTEMS
EEDITLKLKQLKAEVIAKNNKFVNKIISRIKVST
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggatagcgtggccgagtttggcttcgtg
cggttcttccagggcatgccagagaagccgaccaccacggtgcgcctcttcgaccgcggc
gacttctatacagcgcaccgcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatgggacccgcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcttccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacagtgat
ttgtcaacttccattggtgttgtgggtgttaaaatgtctacggttgatggccaaagacag
gtcggagttgggtatgttgactccgtgcagaggaaactaggactgtgtgagttccccgat
aacgatcagttctccactctggaggcgctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggcgacatgggaaaactgaggcagattattcagagagga
ggcattctgatcacagaaagaaaaagaactgacttttccacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtcttgccagaa
atggagaatcagattgcagtttcatccttgtctgcagtaatcaagtatttagaactctta
tcagatgattcaaactttggacaatttgaaatgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaatctttttcagggttctgttgaagacacc
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaacga
ctggttaaccagtggattaagcaacctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagatgcagaattgaggcaaagtttacaagaagattta
cttcgtcgattcccagatctcaacagacttgccaagaaatttcaaagacaagcagccaac
ttacaagattgttaccgactctatcagggtataaatcaactccctcatgttattggggct
ctggaaaaatatgaaggaaaacatcagacattgttgttggcagtttttgtgactcctctt
attgatcttcgctctgatttctccaagtttcaggaaatgatagagacaactttagatatg
gatcaggtggaaaatcatgaattccttgtaaaaccttcatttgatcctaatttgagtgaa
ctaagagaaataatggatgatttagaaaagaagatgcaatcaacattaataagtacagct
agagatctaggcttggattctggcaaacagattaaactggattccaactcacagtttgga
tattactttcgcgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtagatatacagaagaatggtgttaaatttaccaatagtacattgacatctctcaat
gaagagtataccaaaaataaaactgagtatgaggaagcgcaggatgctattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacgctcaatgatgtgctagct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcacctgttccatatgta
cggccggtcattttggagaaaggacaaggaagaattaaattaaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgacgttcactttgagaaagat
aaacagatgttccacatcatcactggccccaatatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcccaaattgggtgttttgtgccatgtgagttggca
gaagtgtccattgtggactgtatcttggcccgggtcggggctggtgacagtcagttgaaa
ggagtctccaccttcatggctgaaatgttagaaactgcttctattctcaggtctgcgacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
gggttagcatgggctatatcagagtacattgcaacaaagatcggtgctttctgcatgttt
gcaacccactttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcatgttgcagagcttgctaatttccctaagcatgta
atagagtgtgctaaacagaaagccctggaactggaggagtttcagaatataggagaatca
caagaaaatgacgaaatggaaccagcagcaaagagatgctatctggaaagagaggaaggt
gaaaaaattattcaagagtttttatgcaaggtgaagcaaatgcctttgactgaaatgtcg
gaagaagacatcacattaaagttaaaacagctgaaagctgaggtgatagcaaagaataat
aagtttgtaaataaaatcatttcacgaataaaggtttctacgtga
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