Rhinolophus ferrumequinum (greater horseshoe bat): 117033906
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Entry
117033906 CDS
T07722
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
117033906 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rfq04040
]
117033906 (TRPA1)
Ion channels [BR:
rfq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117033906 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
SchA_CurD
DUF7694
Motif
Other DBs
NCBI-GeneID:
117033906
NCBI-ProteinID:
XP_032982279
Ensembl:
ENSRFEG00010009505
LinkDB
All DBs
Position
14:9919381..9966443
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AA seq
1127 aa
AA seq
DB search
MASGVGSMKRSLRRMLRPGERQEPQGVLYQGVGDAMDASKDSFKVVFEGSASELKSCMKK
PKKLHKYDDVNASPLHHAAEEGQVELMDMIIHDSSCEVLNVMDNYGNTPLHRAAEKNQVE
SVKFLLSEGANPNLRNRNMMAPLHLAVQGLHNQVVKVLIEHSSTNINLEGENGNTAVIIA
CSKDNSEALQMLLNKGAKPCKSNKWGCFPVHQAAFSGAKKCMEIILKFGEENGYNRQAHI
NFVNNGKSSPLHMAVQSGDLEMIKMCLDNGAQLELIENGKCTALHFAATQGATEIVKLMI
SSYSGSSDIVNARDGNEETLLHRASLFDHHELAEYLISVGADINSTDSEGRSPLLLATAS
ASWNVVNLLLSKGAHVDIKDHLGRNFLHLTVQQPYGLKNLQPEFMQMQHIKELVMDEDND
GCTPLHYACRQGVPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDMSDT
RLLNEGDLHGMTPLHLAAKNGHDKVVQLLLRRGALFLSDHNGWTALHHASLGGYTQTMKV
ILDTNLKCATDQRDEEGNTALHFAATEGHAKAVALLLSYDADIVLNKQQASFLHMAVHNK
RKEVVLTAIRSKRWEECIKVFNHNSPSNKCPIMEMVEYLPECMKVLLDFCMMPSTEEKSC
QDYHIEYNFIYLQEPLEYTRKTSAEDVVTYEPLTTLNAMVQHNRIELLNHPVCKEYLLMK
WLAYGFRAHLLNLGSYCLGLLPMTFLVINIKPGMAFNSTGIINETSDHSEILDTKNSYPI
KVCMILVFLSSLFGYCKEMIQIFQQKRNYFLDHSNGIEWIIYTASIIFVSPLFVGIPAHV
QWQCGAIAIYLYWMNFLFYLQRFENCGIFIVMLEVIMKTLLRSTVVFIFLLLAFGLSFYV
LLSIQDAFSSPVLSIIQTFSMMLGDINYRDAFLEPFLRNELAYPILSFAQLIIFTMFVPI
VLMNLLIGLAVGDIAEVQKHALLKRIAMQVELHTNLEKKLPLWFLRKVDQKSIIVYPNRR
RYRRGLLSIFYYIFCTQEARQEIPNVDTSLEVEILKQKYRLKDLTSLLEKQHELIKLIIQ
KMEIISETEDEDNHSSFQDRYKKEQLEQRNSKWNSVLRAVRANAQYP
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggagtgggctcaatgaagcgcagcctgagaaggatgctgcgccctggggag
aggcaggaaccccagggcgtgctctaccagggcgtgggggatgccatggacgcctccaag
gactcctttaaggtggtgtttgaaggaagcgcaagtgaattaaaaagctgtatgaagaag
ccaaagaaattacacaaatacgatgatgtgaacgcctcccccttgcatcacgctgcagaa
gaaggtcaagtggagctgatggacatgattatccatgactcctcttgtgaagtgctgaat
gtgatggataattatggaaatacccctctgcacagggctgcagagaaaaaccaggttgaa
agtgttaagtttcttcttagcgaaggagccaacccaaacctccggaacaggaacatgatg
gcacccctccatctcgctgtgcaaggcttgcacaaccaggtggtgaaggtcttgattgag
cacagcagtacgaatattaatttggaaggagaaaatggaaatacagctgtgataatcgcg
tgctccaaagataatagtgaggcactgcagatgttgttaaataagggagctaagccgtgt
aaatcaaacaaatggggatgttttcctgttcaccaggctgccttttcaggtgccaaaaaa
tgcatggaaataatattaaagtttggtgaagaaaatggatataacagacaagctcatatt
aactttgtgaataatgggaaatccagtcctctccacatggcagttcaaagtggtgacttg
gaaatgattaaaatgtgcctagacaatggtgcacagttggaactgatagagaatgggaag
tgcacagcccttcattttgctgccacccagggagccactgagattgtcaaattgatgata
tcttcctattctgggagcagtgacatcgtgaatgccagggacggaaatgaggagacgctg
cttcacagggcctcattatttgatcaccatgaactagcagaatacttaatttcagtggga
gcagatattaatagcaccgactctgaaggacgctctcctctgttactggccactgcttct
gcatcttggaatgttgtaaatttgctcctctctaaaggtgcccatgtagacataaaagat
catcttggacgtaatttcttgcatttgactgtacagcaaccatatggattaaaaaatttg
caacctgagtttatgcagatgcaacatattaaagagctggtaatggatgaagacaatgat
gggtgtacccctctccattacgcatgcagacagggggtccctgtctcggtaaataacctc
cttgactttaatgtgtccattcattccaaaagcaaagataaaaaatcacccctacatttt
gcagccagttacgggcgtatcaatacctgccagaggctcctgcaagacatgagtgacacg
aggcttttgaatgaaggtgaccttcatggaatgacccctctccacctggctgcaaaaaat
ggccacgacaaagtggttcagcttctcctgagaagaggtgccttgtttctcagtgaccac
aatggctggactgctttgcatcatgcttccttgggcgggtacactcagaccatgaaggtc
attcttgacacgaatttgaagtgcgcaacagatcagcgtgacgaagaagggaacactgcg
cttcactttgctgcaacagagggccacgccaaagctgtcgccctccttctgagctacgac
gctgacatcgtcctcaacaagcagcaggcctccttcctgcacatggcggttcataataag
aggaaggaggtggttcttacagccatcaggagcaaaagatgggaagaatgtattaaggtt
tttaatcataattctccaagcaataaatgtccgatcatggaaatggtagaatacctccct
gaatgcatgaaagttcttttagatttttgcatgatgccttccacagaagaaaagtcctgc
caagactaccacatcgagtataatttcatatatcttcaggagccattagaatacaccaga
aaaacgtctgcagaggatgtggttacatatgagcctctcacaaccctcaatgcaatggta
caacacaaccgcatagagcttctcaaccatcctgtgtgtaaagaatatttacttatgaaa
tggttagcttatgggtttagagcccatcttctgaacctaggatcgtactgtcttggtctc
ctccctatgacctttcttgttatcaatataaagccagggatggctttcaactcaactgga
atcatcaatgaaactagcgatcattcagaaatactagacaccaagaattcctatcctata
aaagtttgtatgattttagtttttttatcaagtttatttggatattgcaaagaaatgatc
caaattttccaacagaaaaggaattactttttggatcacagcaatggaattgaatggatt
atctacacagcgagcatcattttcgtgtcccccttgttcgtgggtataccagctcacgtg
cagtggcagtgtggggcgattgccatttacttgtactggatgaacttcttattttatctt
cagagatttgaaaactgtggcattttcatcgttatgttggaggtcattatgaagactctg
ttgagatctaccgtcgtgtttatctttctgcttttggctttcggactcagcttttacgtc
ctcctgagtatacaggatgctttcagctctccggtgctttctatcatccagaccttcagc
atgatgctgggagatattaattatcgtgatgccttcctagaaccctttttgagaaatgaa
ctggcatacccaattctgtcctttgcacaacttattatcttcaccatgtttgtcccaatt
gtcctcatgaatttactgatcggcttggcagttggggacattgcagaggtgcagaagcac
gcactgttgaagaggattgctatgcaggtggaacttcacaccaacttagagaagaagctg
ccactctggtttctacgcaaagtggatcagaaatccatcatcgtgtatcccaacagacgc
agatacaggagagggttattaagtatattttattatatcttttgcacccaagaagcaagg
caagaaataccaaatgtcgatacatctttagaggtagaaatattgaagcagaaataccgg
ctgaaggatctgacttctcttctggaaaagcagcatgagcttattaagctcatcattcag
aagatggaaatcatctcggagacagaggatgaagataaccacagttcttttcaggacagg
tataaaaaagagcagttagaacaaaggaacagcaagtggaattctgtgctgagagcagta
agggcaaacgctcagtacccttag
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integrated database retrieval system
