Rhinolophus ferrumequinum (greater horseshoe bat): 117034501
Help
Entry
117034501 CDS
T07722
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117034501 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117034501 (CNOT3)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117034501 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117034501 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
COG6_N
Motif
Other DBs
NCBI-GeneID:
117034501
NCBI-ProteinID:
XP_032983371
Ensembl:
ENSRFEG00010009292
LinkDB
All DBs
Position
15:47538932..47555167
Genome browser
AA seq
775 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTTPGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSAIQPRPPSVQPSGGGGGGCSGSNSSGGGGTGKQNG
ATSYSSVVADSPAEVALSSSGGSNASSQSLGPPSGSHNPPPNASKEPSAAAPAGAGGVAP
GSGNNAGGPSLLVPLPVNPPSSPTPSFSDAKAGGALLNGPPQFSTAPEIKAPEPLSSLKS
MAERAAISSGIEDAVPTLHLTERDLIISSTAAPPPSAQPPLQLSEVNIPLSLGVCPLGPV
PLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQR
LSTETLFFIFYYLEVQQGPGQPQAPRHHHHRRRPPSGWRGEGTKAQYLAAKALKKQSWRF
HTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtcgagcagtttgaagatatttggcagaagctccacaatgcagcgaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaaaacc
aaagcctacagcaaggagggcctgggcctggcgcagaaggtggaccccgcccagaaggag
aaggaggaggttggccagtggctcacgaataccatcgacaccctaaatatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtgcagacgcgcaagaagaagggtgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcggatgctggacaacgactccatcctggtggacgcc
atccgcaagatcaaggatgacgttgagtactacgttgattcctcccaggaccctgacttc
gaggagaatgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagtcacatggaggatgagatcttcaaccagtcaagcagc
acgcccacctccaccacctctagctcacccatcccgcccagccctgccaactgtaccacg
gaaaactcggaagatgacaagaagaggggacgctcgacggatagtgaagtcagccagtct
cccgccaaaaacggctccaagcctgtccacagcagtcagcaccctcagtccccagctgtg
ccgcccagctacccttctggccccccgcctgctgcctctgccctgagcaccacccctggc
aacaatggggcccctgccccggcagcaccgccaagtgctctgggccccaaggccagccca
gctcctagccacaattcgggtacccccgccccctacgcccaggctgtggccccgccagcc
cccagtgggcccagcgccatccagccccggcctcccagcgtccagcccagtgggggaggt
ggcggaggctgcagcggcagtaacagcagtggaggtgggggcaccggcaagcagaacggc
gccaccagttacagctcagtcgtggcagacagtccagcagaggtggctctcagcagcagt
gggggcagcaacgccagcagtcagtctctgggtcccccatctggctcccacaacccaccc
cccaacgcctcgaaggaacccagtgcagctgccccagcaggtgctgggggcgtggcccca
ggctcagggaacaacgctgggggacccagcctcctggtgccacttcctgtgaaccctccc
agctccccgacgcctagcttcagcgacgccaaggcaggtggtgccctgctcaatggaccc
cctcagttcagcaccgccccggagatcaaggcccccgagcctctgagctctctgaagtcc
atggcagagcgggcagccatcagctccggcatcgaggacgcagtgcccacactgcacctg
accgagcgagacctcatcatcagcagcacggcagctcctccaccctcagcccagccgccc
ctccagctgtcagaggtgaacataccgctgtcgctgggtgtgtgtccgctggggcctgtg
cccctcaccaaggagcagctgtaccagcaggccatggaagaggccgcctggcaccacatg
ccccacccctcagactctgagcggatcaggcagtacctcccccggaacccctgcccgacg
cccccctaccaccaccagatgccacccccacactcggacaccgtggagttctaccagcgc
ctgtccactgagaccctcttcttcatcttctactatctggaggtacagcagggccccggg
cagcctcaggccccccggcatcaccaccaccgccgccgtcccccctcgggctggaggggt
gagggcactaaggcacagtacctggcagccaaggccctaaagaagcagtcatggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcacggatgag
ttcgagcagggcacctacatctactttgactacgagaagtggggccagcgaaagaaggaa
ggcttcacctttgagtaccgctacctggaggaccgggacctccagtga
DBGET
integrated database retrieval system
