Rhinolophus ferrumequinum (greater horseshoe bat): 117034657
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Entry
117034657 CDS
T07722
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03030
DNA replication
rfq03410
Base excision repair
rfq03420
Nucleotide excision repair
rfq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117034657 (RFC4)
03410 Base excision repair
117034657 (RFC4)
03420 Nucleotide excision repair
117034657 (RFC4)
03430 Mismatch repair
117034657 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117034657 (RFC4)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117034657 (RFC4)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117034657 (RFC4)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117034657 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
117034657 (RFC4)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117034657 (RFC4)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117034657 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
117034657 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
DUF815
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_19
AAA_5
Viral_helicase1
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
117034657
NCBI-ProteinID:
XP_032983761
Ensembl:
ENSRFEG00010010503
LinkDB
All DBs
Position
2:58760262..58770892
Genome browser
AA seq
369 aa
AA seq
DB search
MGEVTMQAFLKGTSISTKPPLTKDRGVAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQ
DEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERG
IQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTR
FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQRQRLLDIADKEHVKISNEGVSYLVQVSE
GDLRKAITFLQSATRLTGGKEVTEKVITDIAGVVPAETIDGVFAACQSGSFDKLEAVVKD
LIDEGHAATQLVNQLHDVIVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCAT
VMQQLTQNC
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagtaaccatgcaggcatttctaaaaggcacatctatcagtactaaaccacca
ttgaccaaggatcgcggagtagctgccactgctggaagcagtggagagaacaagaaagcc
aaacctgttccatgggtggaaaaatatcgcccaaaatgtgtggatgaagttgctttccaa
gatgaagtggttgcagtgctgaaaaagtctttggaaggagctgatctccctaatctcttg
ttttatgggccacctggaactggaaaaacatccactattttggcagcagctagggaacta
tttgggcctgaactttttcgattaagagttcttgagttaaatgcatctgatgaacgtggg
atacaagtagttagagagaaagtgaagaattttgcccaattaactgtatcaggaagtcgt
tcagatgggaagccatgtcctccttttaagattgtgattctggatgaagcagattctatg
acctccgctgctcaggcagctttaagacgaaccatggagaaagagtctaaaaccactcga
ttctgtctcatctgtaactatgttagtcgaataattgaacctctgacctctagatgttct
aaattccgcttcaaacctctgtcagataaaattcaacggcagcgattactagacattgct
gataaagaacatgtgaaaattagcaatgagggagtatcttatcttgttcaagtgtcagaa
ggagacttaagaaaagccattacatttcttcaaagtgctactcgattaacaggtgggaaa
gaggtcacagagaaggtgatcacggatattgctggggtagtaccagctgagacaattgat
ggagtatttgctgcatgtcagagtggctctttcgacaaactggaagctgtggtaaaggac
ttaatagatgagggtcatgcagcaactcagcttgtaaatcaacttcatgatgtgattgta
gagaatgataacctttctgataaacaaaagtccattattaccgaaaaacttgctgaagta
gataaatgcttagcagatggtgctgatgaacatctccaacttatcagcctctgtgctact
gtgatgcagcaattaactcagaattgttaa
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integrated database retrieval system
