Rhinolophus ferrumequinum (greater horseshoe bat): 117034685
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Entry
117034685 CDS
T07722
Symbol
SF3B3
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117034685 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117034685 (SF3B3)
03041 Spliceosome [BR:
rfq03041
]
117034685 (SF3B3)
03036 Chromosome and associated proteins [BR:
rfq03036
]
117034685 (SF3B3)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117034685 (SF3B3)
Spliceosome [BR:
rfq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
117034685 (SF3B3)
Complex B
117034685 (SF3B3)
Complex C
U2 SnRNP specific factors
117034685 (SF3B3)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
117034685 (SF3B3)
TFTC complex
117034685 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
117034685
NCBI-ProteinID:
XP_032983815
Ensembl:
ENSRFEG00010011817
LinkDB
All DBs
Position
15:complement(21835985..21875173)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTXPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEYLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtataacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctccggaacaaaacaacaggaaattgttgtttcccgtgggaagatcttggagctg
cttcgccctgatcccaacactggcaaagtacacaccctactaactgtggaagtatttggt
gtaatccggtcacttatggcctttaggctgacgggtggcaccaaagactacattgtggtt
ggcagtgactcgggtcggattgttatcctggaataccagccgtctaagaatatgtttgag
aaaattcaccaagaaactttcggcaagagtggatgccgccgtattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgagaaacaaaaattg
gtgtatatcttgaacagagatgcagcagcccggcttaccatctcatctcccctggaggcc
cacaaagcgaacactttagtatatcatgttgtcggagtagatgttggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcggacaatgatcccacaggggaagca
gcagctaatacccagcagacactaactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaacttcctcatcacagttccggga
ggttcagatggtccaagtggagtgctgatctgctctgaaaactatatcacctacaagaac
ttcggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcgatgttcttt
tttttggcccaaactgagcagggcgatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaattcggaaaccattatttgtatcag
attgcacacctaggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gagggagacaccttcttctttcagcccagaccactcaaaaaccttgtgctggttgacgag
ttggacagcctctctcccattttgttttgccagatagctgatctggcaaatgaagacacc
ccacagttgtatgtggcctgtggtaggggaccccggtcatctttgagagtcttaaggcat
ggacttgaggtatcggaaatggctgtctctgaactacccggtaaccccaatgctgtctgg
acagtgcgccggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgttgtctattggagagactgtggaagaagtgactgactctgggttcctg
ggcaccnacccaaccttgtcctgctccttgttaggagatgacgccttggtgcaggtgtat
cctgatggcattcggcacatacgagcagacaagagagtcaatgagtggaagacccccgga
aagaaaacaattgtgaagtgtgcagtgaaccagcgacaagtggtgattgctctgacagga
ggagagctggtctattttgagatggatccctcaggccagctgaatgagtacacagagcgg
aaggagatgtcagcagatgtggtatgcatgagtctggccaacgtgcctcctggagagcag
cggtctcgcttcctggctgtggggctagtggacaacactgtcagaatcatctccctggac
ccttcagactgtttgcaacctctgagcatgcaggctctcccagcccagcctgaatccttg
tgtattgtggagatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcctgtacctgaatattgggttacagaatggtgtgctgctcagaactgtcctggac
cctgtcactggggatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaagcagtattggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgtttccatctcacccccctgtcttatgagaccctggaa
tttgcatctggctttgcctctgaacagtgtcctgagggcattgtggccatctccaccaac
accctgaggattttggcgttagagaagctgggtgccgtcttcaatcaagtggccttccca
ctgcagtacacacccaggaaattcgtcatccaccctgagagtaacaaccttatcatcatt
gagactgaccacaatgcctacaccgaggctacaaaagcccagaggaagcagcagatggca
gaggaaatggtggaagcagcaggggaggatgagcgggagctagctgcagagatggcagca
gcattcctcaatgaaaacctccctgagtccatttttggagctcctaaggcgggcaatggg
cagtgggcgtctgtgatccgagtgatgaatcctattcagggtaacacactggaccttgtt
cagctggaacagaatgaggctgcttttagtgtggccgtttgcaggttttccaacactggt
gatgactggtatgtgctggtgggtgtggccaaagacctgatactgaacccccgatccgta
gcagggggctttgtctatacctacaagcttgtgaacaatggggaaaaactggagtatttg
cacaagactccagtggaagaggtccctgctgccattgctccattccagggtagggtgttg
attggtgtggggaagcttctgcgtgtctatgacctgggaaagaagaagttactccgaaaa
tgtgagaacaagcatatcgccaattacatctctgggatccagactattgggcacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccag
ctcatcatctttgccgatgatacctacccccgatgggtcactacagctagcctcctcgac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaacgacgaagtggacgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgctcaatggtgcctctcagaaggcagaggtgatcatgaactatcacgtgggggagacg
gtgctgtccctgcagaagaccacgctgatccctggaggctcggaatcacttgtctatacc
accctgtcaggagggattggcatccttgtcccattcacatctcacgaggaccatgacttc
ttccagcatgtggaaatgcacctgcggtctgagcatcctcctctttgtgggcgagaccac
ctcagcttccgttcctattatttccctgttaagaatgtgattgatggagacctctgtgag
cagttcaactccatggagcccaacaaacagaagaatgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggactcgctatgccttctga
DBGET
integrated database retrieval system
