Rhinolophus ferrumequinum (greater horseshoe bat): 117034900
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Entry
117034900 CDS
T07722
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04137
Mitophagy - animal
rfq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117034900 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117034900 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117034900 (AMFR)
Enzymes [BR:
rfq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117034900 (AMFR)
Ubiquitin system [BR:
rfq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117034900 (AMFR)
Multi subunit type E3
ERAD complex
117034900 (AMFR)
LMBR1L-GP78-UBAC2 complex
117034900 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
SHOC1_HhH_tandem
SVIP
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
117034900
NCBI-ProteinID:
XP_032984237
Ensembl:
ENSRFEG00010018751
UniProt:
A0A671G017
LinkDB
All DBs
Position
15:complement(9369057..9401951)
Genome browser
AA seq
647 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGSIVSAYRSLSPPEAEAGPGPGEREPITAPVQPD
PAAVAQLSAGGPGARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQ
HLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSP
TTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILR
YVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFM
QLRYLFHEVQRRVRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPC
GHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQGENLDENLVPVAAAEGRPRLN
QHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLV
LQDLQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPVERPNGEQEEGETSAQTER
VPLDVSPRLEEALDFSELEAEPSEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKR
FLNRTSEDDSASESCLPSEGTASDPMTLRRRMLAAAAERRLQKQQTS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgcttcccttggcccagcctccgcacctacacgggcctc
agcggcctggctctgctcggctccatcgtcagcgcctaccgctccctcagcccgcccgag
gccgaggccggacccgggccgggcgagcgggagccgataacggccccggtgcagccagat
ccggccgcggtcgcccagctgagcgccgggggacccggggcccgcgacgtggcccagtac
ctgctctccgacagcctgttcgtgtgggttctggtaaacactgcttgctgtgttttgatg
ttggtggcgaagctgatccaatgtattgtgtttggccctcttcgggtgagtgagagacag
cacctgaaagacaagttttggaattttattttctacaagttcattttcatttttggtgta
ctgaatgtccagaccgtggaagaggtggtcatgtggtgcctctggtttgctggacttgtg
tttctgcatctgatggttcaactctgcaaggaccggtttgaatatctctctttttctccc
accacaccgatgagtagccacggtcgagtgctgtctctgttgatcgctatgctgctttcc
tgctgtggattagcggttgtctgttgtgtcacaggctacacacatggaatgcacacgttg
gcgttcatggctgcggagtctcttcttgtgacagtgaggacggctcatgtgattttacga
tatgtcatccacctttgggacctcaaccacgaagggacatgggaaggaaagggaacatat
gtctattacacagattttgtcatggagctcactctcttgtccctggacctcatgcatcat
attcacatgttgctgtttggcaacatctggctgtccatggccagcctggtcatcttcatg
cagctgcgctacttgttccacgaggtccagcgtcgggtccgccggcacaagaactacttg
cgagtcgtcgggaacatggaagccaggtttgcggttgcgactcccgaggagctggctgtc
aataatgacgactgtgccatctgctgggactccatgcaggctgccaggaaactgccctgt
ggacatcttttccacaattcctgtcttcgttcctggctagaacaggacacctcctgccca
acatgcagaatgtctcttaatatcgctgacaataatcgtgtcagggaagaccatcaggga
gagaacttggatgagaatttggttcctgtagcggcagctgaaggcagacctcgcttaaac
caacacaatcacttcttccacttcgatgggtcccggattgcgagctggctgccgagtttt
tcagtggaggtgatgcacaccacgaacattctaggcatcacgcaggcgagcaactcgcag
ctgaacgcaatggcccatcagattcaagaaatgttcccccaggttccataccacctcgtg
ctgcaggacctccagctgacacgctcagttgaaataacaacagacaacattttagaagga
cggattcaagtaccttttcccacacagcggtcagagagcattagacctgcactgaatagt
cctgtggaaaggccaaacggcgagcaggaggagggagagacttctgctcagacggagcgt
gtgcctctggacgtcagccctcggctggaagaggcgctggacttcagcgagctggaggca
gagcccagtgagggggaagacttcgaggctcgggggagccgcttctccaagtccgccgat
gagagacagcgcatgttagtccagcgcaaggatgacctcctgcagcaagctcggaagcgt
ttcttgaacagaacttcagaagatgactcagcctcggagagctgcctcccctcagaagga
acggcctctgaccccatgaccctgcgtcgaaggatgctggctgcggctgctgaacggaga
ctccagaagcagcagacctcctag
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