Rhinolophus ferrumequinum (greater horseshoe bat): 117035160
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Entry
117035160 CDS
T07722
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117035160 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfq03009
]
117035160 (UTP4)
Ribosome biogenesis [BR:
rfq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117035160 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
NBCH_WD40
Beta-prop_VPS8
Beta-prop_SPT8
PROPPIN
Ge1_WD40
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_RIG_1st
PQQ_2
Motif
Other DBs
NCBI-GeneID:
117035160
NCBI-ProteinID:
XP_032984768
Ensembl:
ENSRFEG00010006384
UniProt:
A0A671EG66
LinkDB
All DBs
Position
15:18328783..18359270
Genome browser
AA seq
686 aa
AA seq
DB search
MGEFNVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAKGQRLFSAGLNGEIIEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLIGC
EDGSVKLFQIIPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAIH
KMLVDRQYMNVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLIANADVQ
SIAVSDQEDSFVVGTAEGTIFHFQLVSVTSSSSEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKKRQLLLFQFSHHLDLWRL
GSTVATGKHGDTLPLSKDADHLLHLKTKGPENIICSCISPCGSWIAYSTASRFFLYRLNY
EHDSISLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHVIRLLEGSFKHLHTFQPQ
SGTVESMCLLAVSPDGNWLAASGTSAGVHVYNVKRLKLHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQIFEYSIPDKQYTEWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMYILVHD
AYMFCIIDKSLPLPNDKTLLYNPLPPTNESDVIRRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaacgtccatcgagttcgtttctttaattatgttccatcagggatccgc
tgtgtggcttacaataaccagtcaaacagattggcagtttcaagaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgagctacggaagctctgtgttgggcaaaaggacagcgactatttagtgccggactcaat
ggagagattattgaatatgatttgcaggcattaaacattaagtatgctatggatgccttt
ggaggacccatttggagcatggctgcaagtcccagtggctctcaacttttgattggctgt
gaagatggatctgtgaaactatttcaaatcatcccagacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcatccctctggcacccacatt
gcagctggctccatagactacattagtgtgttcgatgtcaaatcagggagcgctattcat
aagatgctcgtggataggcagtatatgaatgtgtctaagcgaaagtgtatcatctggggt
gtggccttcctgtctgatggcactgtcataagtgtggattctgctgggaaggtgcagttc
tgggactcggctaccgggacacttgtgaagaaccacctcatcgcaaatgctgacgtgcag
tccattgctgtatctgatcaagaagacagtttcgtggtgggcacagccgaggggacaata
ttccattttcagctggtctctgtgacttccagcagcagcgagaagcagtgggtgcggaca
aagccatttcagcatcacactcacgacgtgcgaactgtggcccacagccccacagcactg
atctccggaggcactgacacccacttagtcattcgtcctctcatggagaaagtggaggta
aagaattatgatgctgccctccgaaaaatcacttttccccatcgacgtctcatttcctgt
tcaaaaaagaggcagcttctcctcttccagttttctcatcacttggatctttggcgactg
ggatctacagttgcaacaggaaagcatggggatacccttccactctctaaagatgcagat
catttactgcacctcaagacaaagggtcccgagaacattatttgcagctgtatctcccca
tgtggaagttggatagcctattctacagcttctcggttttttctctatcggttgaattat
gaacacgatagcataagcctccagagggtttcaaaaatgccagcattccttcgctctgcc
cttcaaattttgttttctgaagattcaacaaagctctttgtggcatcaaatcaagggtct
ctacatgtcattcggctcttggaaggaagcttcaagcacctgcatactttccagcctcag
tcagggactgtggagtccatgtgccttttggcagtcagtccagatgggaattggcttgct
gcatcaggtaccagtgctggagtccatgtgtacaacgtaaaacgtctaaagcttcactgc
acagtccctgcttacaatttccctgtgactgctctggccattgcccccaataccaacaac
ctggtcatcgctcattctgaccagcagatatttgaatacagcatcccagacaaacagtat
acagagtggagccggactgtccagaagcagggcttccatcacctttggctccaaagggac
actcccatcacacacatcagttttcatcccaagagaccgatgtacattcttgtccacgat
gcctacatgttctgtatcatcgacaagtcattgcctcttccaaatgacaaaaccttactg
tacaatccacttcctcccacgaatgagtcagatgtcatcaggaggcgcacagcccatgcc
tttaaaatttctaagatatataagcctctactcttcatggatcttttggatgaaagaacg
ctggtggcagtagaacggcccctggatgacatcattgctcagctcccaccacccatcaaa
aagaagaaatttgggacctaa
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