Rhinolophus ferrumequinum (greater horseshoe bat): 117035760
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Entry
117035760 CDS
T07722
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117035760 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117035760 (EXOSC1)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117035760 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117035760 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
117035760
NCBI-ProteinID:
XP_032985643
Ensembl:
ENSRFEG00010012162
UniProt:
A0A671F314
LinkDB
All DBs
Position
16:26351575..26357365
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AA seq
195 aa
AA seq
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MAPPVRYCIPGERLCNLEEASPGSGTYTRHGYIFSSLAGCMTKSSENGALPVVSVMRETE
SQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFHPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatccccggcgaacggctctgtaacttggaggaggcc
agcccaggcagcggcacctacacccggcacggctacatcttttcgtcgcttgctggctgc
atgacgaaaagcagcgagaatggcgcgcttcctgtcgtgtctgtaatgagagaaacagag
tcccagttactgccagatgtcgggactattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctgtacgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgaaatttataag
agtttccacccaggtgacattgttttggccaaagtgatctccctgggtgatgcacaatcc
aactacctcctgaccactgctgaaaacgagctcggtgtggtggtggcccacagcgaatca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggcccgagtacagcctgaattcttgcagacctaa
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